More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_2422 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_2422  two component LuxR family transcriptional regulator  100 
 
 
196 aa  380  1e-105  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0496562  normal  0.787858 
 
 
-
 
NC_007493  RSP_0511  two component LuxR family transcriptional regulator  59 
 
 
191 aa  199  1.9999999999999998e-50  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2163  two component LuxR family transcriptional regulator  57.5 
 
 
191 aa  195  5.000000000000001e-49  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.394692  normal  0.0704049 
 
 
-
 
NC_007493  RSP_0087  two component transcriptional regulator, LuxR  34.63 
 
 
210 aa  112  4.0000000000000004e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.197031  n/a   
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  36.95 
 
 
214 aa  112  4.0000000000000004e-24  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1723  two component LuxR family transcriptional regulator  34.63 
 
 
240 aa  112  4.0000000000000004e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1676  two component LuxR family transcriptional regulator  34.63 
 
 
210 aa  112  4.0000000000000004e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.123322  normal 
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  34.36 
 
 
207 aa  92.8  3e-18  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  37.02 
 
 
235 aa  86.7  2e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_007489  RSP_4131  two component LuxR family transcriptional regulator  30.39 
 
 
220 aa  86.3  3e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  37.27 
 
 
230 aa  85.9  3e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  32.69 
 
 
204 aa  85.1  6e-16  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  31.55 
 
 
209 aa  81.3  0.000000000000008  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1894  putative response regulator receiver protein  32.02 
 
 
204 aa  80.9  0.00000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.761861  normal  0.0769356 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  35.78 
 
 
224 aa  79.3  0.00000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  29.52 
 
 
209 aa  79  0.00000000000004  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  31.58 
 
 
212 aa  78.6  0.00000000000006  Opitutus terrae PB90-1  Bacteria  normal  normal  0.383896 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  31.78 
 
 
219 aa  78.6  0.00000000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  36.11 
 
 
221 aa  77.4  0.0000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  39.07 
 
 
221 aa  77.4  0.0000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  32.04 
 
 
213 aa  75.9  0.0000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  31.78 
 
 
221 aa  75.5  0.0000000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  32.08 
 
 
215 aa  75.9  0.0000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  32.41 
 
 
224 aa  75.5  0.0000000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.03 
 
 
226 aa  75.5  0.0000000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  34.25 
 
 
225 aa  75.5  0.0000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  31.25 
 
 
225 aa  75.5  0.0000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  33.02 
 
 
220 aa  75.5  0.0000000000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  34.43 
 
 
218 aa  75.1  0.0000000000006  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  30.73 
 
 
217 aa  75.1  0.0000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  35.16 
 
 
225 aa  74.7  0.0000000000007  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  34.72 
 
 
220 aa  75.1  0.0000000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  27.54 
 
 
207 aa  74.7  0.0000000000007  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  27.54 
 
 
207 aa  74.7  0.0000000000007  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  27.88 
 
 
213 aa  74.7  0.0000000000009  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  32.24 
 
 
228 aa  74.3  0.0000000000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  35 
 
 
226 aa  74.3  0.0000000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  30.39 
 
 
206 aa  73.9  0.000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  31.58 
 
 
211 aa  73.9  0.000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  33.01 
 
 
209 aa  74.3  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  33.64 
 
 
219 aa  73.9  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  33.49 
 
 
218 aa  73.2  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  29.19 
 
 
209 aa  73.6  0.000000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  32.82 
 
 
209 aa  73.6  0.000000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  32.59 
 
 
222 aa  72.8  0.000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  32.41 
 
 
220 aa  73.2  0.000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  32.55 
 
 
210 aa  72.8  0.000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  28.23 
 
 
224 aa  72.4  0.000000000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  29.91 
 
 
238 aa  72.4  0.000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.64 
 
 
204 aa  72.4  0.000000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  32.42 
 
 
230 aa  72.4  0.000000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  34.6 
 
 
214 aa  72.4  0.000000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.8 
 
 
223 aa  72  0.000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_010571  Oter_2496  two component LuxR family transcriptional regulator  32.52 
 
 
212 aa  71.6  0.000000000006  Opitutus terrae PB90-1  Bacteria  normal  normal  0.996792 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  33.64 
 
 
224 aa  71.2  0.000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  33.33 
 
 
234 aa  70.9  0.00000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  33.02 
 
 
218 aa  70.9  0.00000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  28.97 
 
 
224 aa  70.9  0.00000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  33.02 
 
 
218 aa  70.9  0.00000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  34.63 
 
 
214 aa  70.9  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2689  two component LuxR family transcriptional regulator  30.95 
 
 
224 aa  70.5  0.00000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.270095  normal  0.632538 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  30.19 
 
 
217 aa  70.1  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  33.96 
 
 
302 aa  70.1  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  33.8 
 
 
222 aa  70.1  0.00000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  30.97 
 
 
241 aa  70.1  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  31.02 
 
 
219 aa  70.1  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  32.21 
 
 
213 aa  70.1  0.00000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0595  transcriptional regulator FimZ  28.3 
 
 
210 aa  69.3  0.00000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.447967  n/a   
 
 
-
 
NC_011205  SeD_A0598  transcriptional regulator FimZ  28.3 
 
 
210 aa  69.3  0.00000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.110504 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  33.02 
 
 
233 aa  69.3  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  26.76 
 
 
216 aa  69.7  0.00000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0094  two component transcriptional regulator, LuxR family  34.1 
 
 
220 aa  69.3  0.00000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  32.71 
 
 
218 aa  69.3  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  33.64 
 
 
227 aa  69.7  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009565  TBFG_10861  nitrate/nitrite response transcriptional regulatory protein narL  35.16 
 
 
216 aa  69.7  0.00000000003  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000061441 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  28.5 
 
 
209 aa  68.9  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  26.7 
 
 
212 aa  68.9  0.00000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  37.33 
 
 
226 aa  68.9  0.00000000004  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  33.02 
 
 
225 aa  68.9  0.00000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_011083  SeHA_C0659  transcriptional regulator FimZ  29.72 
 
 
210 aa  68.9  0.00000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.611229  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  34.48 
 
 
212 aa  68.9  0.00000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0594  transcriptional regulator FimZ  29.72 
 
 
210 aa  68.9  0.00000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.627077  hitchhiker  0.00790766 
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  31.25 
 
 
209 aa  68.9  0.00000000005  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  31.68 
 
 
215 aa  68.9  0.00000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0602  transcriptional regulator FimZ  29.72 
 
 
210 aa  68.9  0.00000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.379869  normal  0.0923244 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  32.88 
 
 
226 aa  68.9  0.00000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  31.63 
 
 
219 aa  68.6  0.00000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  34.58 
 
 
220 aa  68.9  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  26.6 
 
 
252 aa  68.6  0.00000000005  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  29.95 
 
 
209 aa  68.2  0.00000000007  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  32.84 
 
 
215 aa  68.2  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  31.34 
 
 
218 aa  67.8  0.00000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  29.46 
 
 
230 aa  67.8  0.00000000009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  34.76 
 
 
209 aa  67.4  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_007489  RSP_4133  two component LuxR family transcriptional regulator  27.72 
 
 
240 aa  67.8  0.0000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  33.33 
 
 
225 aa  67.8  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_007651  BTH_I1849  DNA-binding response regulator NarL  29.46 
 
 
233 aa  67.8  0.0000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2039  two component LuxR family transcriptional regulator  36.32 
 
 
212 aa  67.8  0.0000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  27.4 
 
 
212 aa  67.4  0.0000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  31.82 
 
 
215 aa  67  0.0000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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