More than 300 homologs were found in PanDaTox collection
for query gene Mvan_0348 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_0348  putative GAF sensor protein  100 
 
 
341 aa  673    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.858795 
 
 
-
 
NC_008726  Mvan_0349  response regulator receiver protein  36.06 
 
 
392 aa  144  3e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.83845 
 
 
-
 
NC_008726  Mvan_3973  putative GAF sensor protein  40.72 
 
 
399 aa  141  1.9999999999999998e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.057323  normal 
 
 
-
 
NC_013739  Cwoe_4359  transcriptional regulator, LuxR family  35.04 
 
 
302 aa  127  4.0000000000000003e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3991  putative GAF sensor protein  32.49 
 
 
301 aa  121  9.999999999999999e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.637785  normal 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  56.52 
 
 
221 aa  76.6  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0403461 
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  58.46 
 
 
214 aa  75.5  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.749326 
 
 
-
 
NC_013739  Cwoe_4360  transcriptional regulator, LuxR family  35.68 
 
 
381 aa  73.2  0.000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2370  nitrate/nitrite response regulator protein NarP  42.68 
 
 
203 aa  66.2  0.0000000008  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  56.9 
 
 
215 aa  65.5  0.000000001  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013739  Cwoe_1303  transcriptional regulator, LuxR family  58.62 
 
 
442 aa  65.9  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0533222  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  58.33 
 
 
225 aa  65.5  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  59.68 
 
 
221 aa  65.5  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  40.4 
 
 
231 aa  64.7  0.000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0608  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  65.1  0.000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3222  two component transcriptional regulator, LuxR family  60 
 
 
218 aa  64.3  0.000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000001545 
 
 
-
 
NC_008699  Noca_3120  response regulator receiver  52.31 
 
 
212 aa  63.5  0.000000005  Nocardioides sp. JS614  Bacteria  normal  0.230577  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  49.21 
 
 
211 aa  63.5  0.000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3324  two component transcriptional regulator, LuxR family  47.06 
 
 
219 aa  63.2  0.000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0107044  normal  0.345616 
 
 
-
 
NC_009455  DehaBAV1_1162  two component LuxR family transcriptional regulator  46.67 
 
 
225 aa  62.8  0.000000008  Dehalococcoides sp. BAV1  Bacteria  normal  0.130665  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.63 
 
 
224 aa  62.8  0.000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  30.77 
 
 
210 aa  62  0.00000001  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  30.77 
 
 
210 aa  62  0.00000001  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  30.77 
 
 
210 aa  62  0.00000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  30.19 
 
 
210 aa  62.4  0.00000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  30.77 
 
 
210 aa  62  0.00000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  30.77 
 
 
210 aa  62  0.00000001  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  47.37 
 
 
225 aa  62.4  0.00000001  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  45.56 
 
 
221 aa  62  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  30.77 
 
 
210 aa  62  0.00000001  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_009456  VC0395_0287  LuxR family transcriptional regulator  46.3 
 
 
224 aa  62.4  0.00000001  Vibrio cholerae O395  Bacteria  normal  0.1053  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  30.77 
 
 
210 aa  62  0.00000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  46.84 
 
 
225 aa  62  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  30.77 
 
 
210 aa  61.6  0.00000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  43.82 
 
 
225 aa  61.2  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  46.99 
 
 
217 aa  61.2  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.85 
 
 
221 aa  61.2  0.00000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  30.77 
 
 
210 aa  61.6  0.00000002  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  50.72 
 
 
216 aa  61.2  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  30.46 
 
 
210 aa  61.6  0.00000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1350  LuxR family DNA-binding response regulator  45.61 
 
 
225 aa  60.8  0.00000003  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.00111586  n/a   
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  46.55 
 
 
219 aa  61.2  0.00000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  46.55 
 
 
219 aa  61.2  0.00000003  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  46.55 
 
 
219 aa  61.2  0.00000003  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  54.39 
 
 
224 aa  60.8  0.00000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  37.6 
 
 
210 aa  60.8  0.00000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  39.76 
 
 
211 aa  60.5  0.00000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  45.35 
 
 
209 aa  60.5  0.00000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_008825  Mpe_A1686  two component LuxR family transcriptional regulator  53.33 
 
 
240 aa  60.5  0.00000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.173725  normal  0.554277 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  48.1 
 
 
224 aa  60.5  0.00000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  54.55 
 
 
227 aa  60.8  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6695  two component LuxR family transcriptional regulator  50 
 
 
398 aa  60.5  0.00000004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  43.9 
 
 
220 aa  60.5  0.00000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  56.36 
 
 
228 aa  60.1  0.00000005  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  43.96 
 
 
242 aa  60.1  0.00000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  46.27 
 
 
209 aa  60.1  0.00000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  55.36 
 
 
218 aa  60.5  0.00000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000643495  hitchhiker  0.000215707 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  48.57 
 
 
218 aa  60.1  0.00000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  33.33 
 
 
242 aa  60.1  0.00000006  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007348  Reut_B5475  regulatory protein, LuxR  36.04 
 
 
911 aa  60.1  0.00000006  Ralstonia eutropha JMP134  Bacteria  normal  0.450601  n/a   
 
 
-
 
NC_009380  Strop_2513  regulatory protein, LuxR  50 
 
 
964 aa  60.1  0.00000006  Salinispora tropica CNB-440  Bacteria  normal  0.0733559  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  51.79 
 
 
228 aa  60.1  0.00000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  51.72 
 
 
215 aa  59.7  0.00000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  51.79 
 
 
207 aa  59.7  0.00000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0897  ATP-dependent transcriptional regulator-like protein protein  41.3 
 
 
933 aa  59.3  0.00000008  Methylibium petroleiphilum PM1  Bacteria  normal  0.571021  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  51.72 
 
 
227 aa  59.3  0.00000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_007348  Reut_B4759  regulatory protein, LuxR  31.8 
 
 
913 aa  59.3  0.00000009  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2193  transcriptional regulator, LuxR family  50.94 
 
 
258 aa  59.3  0.00000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  59.62 
 
 
215 aa  59.3  0.00000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  44.93 
 
 
222 aa  59.3  0.00000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  56.9 
 
 
208 aa  59.3  0.00000009  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_004347  SO_2725  LuxR family transcriptional regulator  50 
 
 
211 aa  58.5  0.0000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_0906  transcriptional regulator, LuxR family  61.54 
 
 
208 aa  58.9  0.0000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.000000244022  n/a   
 
 
-
 
NC_007333  Tfu_1817  LuxR response regulator receiver  54.55 
 
 
236 aa  58.5  0.0000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2603  two component LuxR family transcriptional regulator  36.79 
 
 
226 aa  58.9  0.0000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0876088  n/a   
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  55 
 
 
214 aa  58.9  0.0000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2812  transcriptional regulator, LuxR family  61.22 
 
 
522 aa  58.9  0.0000001  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.000674561  hitchhiker  0.0000653029 
 
 
-
 
NC_007974  Rmet_5822  LuxR family transcriptional regulator  41.56 
 
 
914 aa  58.9  0.0000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  55.74 
 
 
241 aa  58.5  0.0000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  52.83 
 
 
232 aa  58.5  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  50.91 
 
 
213 aa  58.9  0.0000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_008321  Shewmr4_2316  LuxR family transcriptional regulator  50 
 
 
211 aa  58.5  0.0000001  Shewanella sp. MR-4  Bacteria  normal  0.0642505  normal 
 
 
-
 
NC_008322  Shewmr7_2386  LuxR family transcriptional regulator  50 
 
 
211 aa  58.5  0.0000001  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  43.59 
 
 
218 aa  58.9  0.0000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2509  LuxR family transcriptional regulator  50 
 
 
211 aa  58.5  0.0000001  Shewanella sp. ANA-3  Bacteria  normal  0.592216  hitchhiker  0.00000482381 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  58.5  0.0000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  55.36 
 
 
223 aa  58.9  0.0000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  53.45 
 
 
235 aa  58.9  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013235  Namu_3769  transcriptional regulator, LuxR family  49.18 
 
 
205 aa  58.9  0.0000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0158689  normal  0.601222 
 
 
-
 
NC_009379  Pnuc_0564  two component LuxR family transcriptional regulator  28.68 
 
 
197 aa  59.3  0.0000001  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  54.1 
 
 
212 aa  58.9  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.15 
 
 
217 aa  59.3  0.0000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.227707 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  35.19 
 
 
234 aa  59.3  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_009511  Swit_0502  regulatory protein, LuxR  56.6 
 
 
861 aa  58.9  0.0000001  Sphingomonas wittichii RW1  Bacteria  normal  0.0169233  normal  0.80601 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  54.24 
 
 
211 aa  59.3  0.0000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.76 
 
 
230 aa  58.9  0.0000001  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  44.68 
 
 
221 aa  58.9  0.0000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  50 
 
 
219 aa  58.5  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  52.73 
 
 
203 aa  58.2  0.0000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal 
 
 
-
 
NC_008825  Mpe_A0892  ATP-dependent transcriptional regulator-like protein protein  41.98 
 
 
896 aa  58.5  0.0000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.311866  normal 
 
 
-
 
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