| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5822 |
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| Symbol | |
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| ID | 4042686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 7265 |
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| End bp | 10009 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981241 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_587950 |
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| Protein GI | 94314741 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CGACCAGCCG CAAGCCCGGT GACAGTGACA CGCAGCGGCG GGGACTGGTT
GCCTCCAAGC TTGTGCCGCC CCGCGCCTTG CCGAATCATC TGGTCCGCTC GCGCCTTGTC
GACGTGATGG TGGACGCCGC CTCGGCCCGC CTGATCCTGG TCCGCGCCGC AGCCGGCTTC
GGCAAGACCA CACTGATGCA GCAGTACCTG GAACGGTGCC AGGCCGGCCA GCGAGCCTGC
GTGTGGTTGC GATGCGATGC CGCCGACAAT GACCTGCAGC GTTTTCTTCT GCATCTCCAC
ACGGGCTTGC TCAGGCTGCC GGGCTTGACC CGCCATCAGC GCGACGAACG CTCCGACACC
ATTGCTGGCG AAACCATCGC GCACGAGATC ATCGAGATCG CGGCCTCCTA TGCGCACCCA
TTCGCCATCC TGCTCGACGA TCTCGAAGTC ATCCAGAATG ACGCGATCAC CGAATATCTG
CAGCAACTGG TCAGAGTGCT GTCGCCGCAG GGTGTGCTGG TCATCGGCAC GCGCGCCACG
CCAGACCTCG GCCTTGGTGG ACTTCGCGCA AGGGGCCAGC TTCTGGATAT CAACCCGGCC
GCATTGCGCT TCAGCGCGGA AGAGGCCGCC AGCTTCATCC GGGACAAGTG CGGGCTGCCG
CTGCCGGACG GCGAGATCGC CACGCTATGG CGCTGCACCG AGGGCTGGGC GGCAGCCGTC
TACCTGGCCA CGCTCTCGCT GCGCGGACAT CCCAATCATG CGGCGTTCGT CCGCTCGTTC
TCGGGTACCA ATATCGAGCT GGCCGAGTAT CTGGCGGAAG ACATCCTGAT GGGGCAAAGC
GAATCCTGCC GCGACTTCCT GCTACAGACC AGTCTGCTTG GCCAACTGTC GGCGCCACTG
TGCGATGCCG TGACCGGACG GCACGACAGC CGCGAAATGC TGAGCTTCCT GGAGCGGAAC
AACCTGTTCA TTACGCCGCT CGATGGCGAG CATCAGTGGT ATCGCTATCA CAGCCTCTTC
GCCAGCTTCC TGCAGCATCG GCTGCAAGTG ACCTATCCGG ACAAGGCGCG CGCGCTGCAT
GTGGCGGCAT CGCGCTGGTA CCTGTCGGAG GATCGTCCCG TCCCGGCGAT CGAGCACCTG
CTGCAAGCCG GACTTGACGA TGAGGCGCTG CCGCTGATCG CCATCCATAC ACCAGCCCTG
TTCCAGGCGG GCCGCGTGCG ACTGCTGGCG CGATGGCTCG ACCGCATCGA CCGCAAGCGC
TTGCTCGCGG ACCCCCATCG CATGGGTCTG GCCTATGCCT GGGTCCTGTT GCTCAATCGC
CGCTATTCGG AAGCGATGCA GACGATGGCG GCGTTGCTTG CGGCGGATGT TCCCGCCGAC
CAGCAGGCGA AGATTGCCTT CGAGGTCGAG ACGCTGCGAT GTGTGCTGCT GGCGATGACC
GACCAGATCG AAGCGTGTCT GGCCGCCGGC CTGGCGCATC TGGAGCGGAT TCCCCCGGAC
GCGCCCTTCC GGTACGCCAG CGTGGTCAAC TCGCAGGCGT TTTCGCTGGT GGCCAGTCAT
CGGTACGAGG ACGCGCGCCG TGTGCTGTCG CGCCTGATGC CGGGTGCGAA CGATGTGCGG
ACAGGATTCC AGCGCGGCAT CGCGGATTCT CTCGAAGGCG TCATCGATCT GGTGCAGGGC
CGACTCAGCA ATGCACTTGC GCGGTTCCGC GCCGTCGCCG AGCGAGGCTG GAGCCCTAGC
GAGGTGAGCA GTCTCAGACA CGCCTTCCTT CCGGCATGGG CCACAGCCCT CTATGAGGCG
AACGCTCTCG AGGATTGCGC ACGCGTGCTG GCCGAAGCGA TGCCCTACTG CAAGGGCTAC
GCGCCGCCGG ACGCCATGAT TGCCGGGTTC ATTCTCTCGG CGCGGTTGGC GCTGCTGGGC
GGCGACCGCG ACCGCTGGCT GCGTATGCTG GCGGAGCTTG AGGAGATCGG CCGCGGCATT
CAGTTGCCGC GCGCCATCTG TTCGGCCTGG CTGGAGCGCG TGCGCGTTGC CACGATCGAA
GGCCGGCTCG ATGCCGCCGA TCAGGCGTTG CGCAGCGCCG AACTGCACGC CGACTGGGCC
GCGAGTGACA GCTATGGCCA TGCGAACGAC ATCGACTTCC CGGACTCGAT CGGCTGGAGA
CTCGCGATCG CGCATGGCGA GCATGAACAG ACCGCGTCAG AACTGGCCGA TGCCATCGCG
GTTGCCACCC AACGCCAGCG GCACTGGCGT GCACTGAAGC TCCGGCTTCT GCTGGCCATG
GCGCTCGATG GCGCGGGCAG GCAGTCCGAA GCGTTCGAGC CGTTGACCGA GGCCATGCGG
CTCGCCAGTC ATGAAGGGCT CGTACGGACG TTCGTGGACG AAGGCGATCG TCTGGCGGAT
CTGCTAAGGC GATGGGCCGA CGCGCGTGAA GCGGAGATCG TACGCGCCGG CATCGACCTT
CAGTTCGTCC GCACAGTGCT TGCGCAGATT CCGACGCCAT TGGCCGTGGC CGGCGAGGAA
GTGAACAAGG CGCGCGGCGC TGCCATCGCG GAGCCTTTGA CGACCCGCGA GCAGGAAGTC
CTGCAGATGC TTGCCGCAGG CCATCGCAAT CGCGTGATCG CCGAGAAAAT GTTCGTGTCG
GAGCTGACGA TCAAGTCTCA CCTGCGCAAG ATCAACGCCA AGCTCGGCGC GCAGAGCCGC
ACGGAAGCCG TCGCCATCGG GCGTAGTCTT GGACTGCTTC GATAG
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| Protein sequence | MSAATSRKPG DSDTQRRGLV ASKLVPPRAL PNHLVRSRLV DVMVDAASAR LILVRAAAGF
GKTTLMQQYL ERCQAGQRAC VWLRCDAADN DLQRFLLHLH TGLLRLPGLT RHQRDERSDT
IAGETIAHEI IEIAASYAHP FAILLDDLEV IQNDAITEYL QQLVRVLSPQ GVLVIGTRAT
PDLGLGGLRA RGQLLDINPA ALRFSAEEAA SFIRDKCGLP LPDGEIATLW RCTEGWAAAV
YLATLSLRGH PNHAAFVRSF SGTNIELAEY LAEDILMGQS ESCRDFLLQT SLLGQLSAPL
CDAVTGRHDS REMLSFLERN NLFITPLDGE HQWYRYHSLF ASFLQHRLQV TYPDKARALH
VAASRWYLSE DRPVPAIEHL LQAGLDDEAL PLIAIHTPAL FQAGRVRLLA RWLDRIDRKR
LLADPHRMGL AYAWVLLLNR RYSEAMQTMA ALLAADVPAD QQAKIAFEVE TLRCVLLAMT
DQIEACLAAG LAHLERIPPD APFRYASVVN SQAFSLVASH RYEDARRVLS RLMPGANDVR
TGFQRGIADS LEGVIDLVQG RLSNALARFR AVAERGWSPS EVSSLRHAFL PAWATALYEA
NALEDCARVL AEAMPYCKGY APPDAMIAGF ILSARLALLG GDRDRWLRML AELEEIGRGI
QLPRAICSAW LERVRVATIE GRLDAADQAL RSAELHADWA ASDSYGHAND IDFPDSIGWR
LAIAHGEHEQ TASELADAIA VATQRQRHWR ALKLRLLLAM ALDGAGRQSE AFEPLTEAMR
LASHEGLVRT FVDEGDRLAD LLRRWADARE AEIVRAGIDL QFVRTVLAQI PTPLAVAGEE
VNKARGAAIA EPLTTREQEV LQMLAAGHRN RVIAEKMFVS ELTIKSHLRK INAKLGAQSR
TEAVAIGRSL GLLR
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