| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2316 |
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| Symbol | |
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| ID | 4252887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2762562 |
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| End bp | 2763197 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118941 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_734444 |
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| Protein GI | 113970651 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0642505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAA TATTACATTG GATTGTAGTG TCAAGATCAC AAGTGCTGAT GGAATTACTG
GCAGGACGCT GGCCACAGGA ATTTCTGGTG AAGCTATCGC AGGTGAACCC TGACGAGATG
TGTGATCAAA TCAAAGATAA CCAAGCTTCC ATGGTGGTGA TTGATCTTTC CACCGTCGAC
CTTCAGAAAG CCTATCAATT TCAACGCTTG CTCGCCCGCG AACACCCGAG TGTGCGAGTC
GTCTATATCC AATTTCCTAA GCAGGTTGAT GCCCGTTTCT TAATGCAAGC CTCGACTACG
GCTGGGGTGT TTTATCTGGA TGCAGGACTG ACTGAAATCA GCCTTGGCCT CTCCAACATC
CTACGTGGAC ACAGAGTGAT CCCTATCCAA TTGGTGAACG GGGTGAATGA TGACTTTGGA
CTGTTCGAAG ATACCGAGCC ATTAACTATC CGTGAGCGCG AAGTGTTACA AGCCCTGCTG
TCTGGCAGCA CTAACCTCGA TATCGCCAAT CAATTGTTTG TGAGTGAAAG CACCATTAAG
ACTCACTTGT ACCGTGTCTT CCGTAAGATT GGTGTGTCTA GCCGTGGTCA AGCCATCGCT
TGGGCGCAAA CCTATTTACA CGATGTGGTG GTGTAA
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| Protein sequence | MFKILHWIVV SRSQVLMELL AGRWPQEFLV KLSQVNPDEM CDQIKDNQAS MVVIDLSTVD
LQKAYQFQRL LAREHPSVRV VYIQFPKQVD ARFLMQASTT AGVFYLDAGL TEISLGLSNI
LRGHRVIPIQ LVNGVNDDFG LFEDTEPLTI REREVLQALL SGSTNLDIAN QLFVSESTIK
THLYRVFRKI GVSSRGQAIA WAQTYLHDVV V
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