| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6695 |
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| Symbol | |
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| ID | 5675008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 8130550 |
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| End bp | 8131746 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245543 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001510935 |
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| Protein GI | 158318427 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCGCC TGGCCACGGT GCTGCCGGTG GGGGATGTGA TCTTCCTGCT CCTCAGCGTC
GGCGTCGCGG CCGCCGCGCT GGGGTTCGCG GTGCGCATCC GCCGCGCGCA GCTGGCCGCG
CTGCGCGACC GGGCCCGTCA GCTCGAGATC GAGCGAGACC AGCGCAGCAG ACTCGTGGCG
GCCAGCGAGC GCGCCCGGAT GGCCCGCGAG ATGCACGACA TCGTCGGCCA CAGCCTCGCA
GTGATCATCG CGCTGGCTGA CGGCGGCGCG TACGCCGTGG ACGTCGCGCC CGAACGCGGC
AAAGAAGCGC TCAACCTGAT CGGCGACACC AGCCGCCGGT CGCTCGGCGA GCTGCGCCGC
ATCCTCGGCG TACTGCGGGA GCGTGCCGAG GCGCCCGATC TCAGCCCGCA GCCGCGCATC
GCCGATCTCG ACTCGCTGTG CCGGCGCGTC CGCGCGGCCG GGCCGCAGGT TGAGTACCAG
AGCGCCGGTG AGCTCGATGC ACTGGATCTC GGGGTGCAGC TGGCGGCGTA CCGCATCGTC
CAGGAGGCGC TCACCAACAT CCTCAAGCAC GCCGGCCCGC GCACCCGGGT GCGCATGGCG
CTGCGCATCG ACGGCACCCG GCTTCGGATC ATGATCCGGG ACAAACGTCT CGGCTTCCGC
ATGCTGCTCG AGAGCAACCC CGACACGGAG GTGGCCGGCG GCGGCCGCTC GCGCATCCTC
ATACTCACGA CCTTCGATCT CGACGAGTAC GTGCACGCCG CGCTTCGCGC CGGCGCCAGC
GGCTTCCTGC TGAAGGACGC CTATCCCGAG GAGCTCCTCG CCGGCATCCG GGCGGTCGCC
GTCGGCGACG CGGTCATCGC ACCCGCCCTC GCCAGGCGCC TGCTCGACGC GTTCGCACAG
CATCTCGGCG ATGCCCTCCC GGACGGGGAG CGGGCCGCCG ACCCGCGCCT GGACACGCTG
ACCGAACGGG AACGCGAGAT CCTCGTCGCC ATCGGCCACG GCTGGACGAA CGGCGAGATC
GCCGAGCGGC TGGTCCTGTC CGAATCGACC GTCAAGACCC ACGTGGGCCG CATGCTCGCG
AAGATCGGCG CCCGGGACCG GGTGCAGGCC GTCATCTGTG CCTATGACCT TGGCCTGACC
CGCCCGCAGG CCCGTACCGA AACCGCCCGG GACCACGGAA CCGACAATCG GCAATAA
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| Protein sequence | MIRLATVLPV GDVIFLLLSV GVAAAALGFA VRIRRAQLAA LRDRARQLEI ERDQRSRLVA
ASERARMARE MHDIVGHSLA VIIALADGGA YAVDVAPERG KEALNLIGDT SRRSLGELRR
ILGVLRERAE APDLSPQPRI ADLDSLCRRV RAAGPQVEYQ SAGELDALDL GVQLAAYRIV
QEALTNILKH AGPRTRVRMA LRIDGTRLRI MIRDKRLGFR MLLESNPDTE VAGGGRSRIL
ILTTFDLDEY VHAALRAGAS GFLLKDAYPE ELLAGIRAVA VGDAVIAPAL ARRLLDAFAQ
HLGDALPDGE RAADPRLDTL TEREREILVA IGHGWTNGEI AERLVLSEST VKTHVGRMLA
KIGARDRVQA VICAYDLGLT RPQARTETAR DHGTDNRQ
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