More than 300 homologs were found in PanDaTox collection
for query gene Cfla_3222 on replicon NC_014151
Organism: Cellulomonas flavigena DSM 20109



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014151  Cfla_3222  two component transcriptional regulator, LuxR family  100 
 
 
218 aa  410  1e-114  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000001545 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  70.37 
 
 
220 aa  264  7e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  62.56 
 
 
213 aa  238  6.999999999999999e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  61.24 
 
 
209 aa  218  7.999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_17000  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  61.16 
 
 
233 aa  213  1.9999999999999998e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.523967 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  58.72 
 
 
226 aa  212  2.9999999999999995e-54  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  57.75 
 
 
232 aa  209  2e-53  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  57.08 
 
 
227 aa  209  4e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.21 
 
 
226 aa  208  6e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  57.67 
 
 
225 aa  207  7e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  54.46 
 
 
213 aa  207  8e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  56.62 
 
 
226 aa  203  2e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  57.21 
 
 
220 aa  200  9.999999999999999e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  54.34 
 
 
230 aa  201  9.999999999999999e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  55.61 
 
 
222 aa  198  3.9999999999999996e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  53.02 
 
 
214 aa  196  2.0000000000000003e-49  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  53.74 
 
 
222 aa  195  4.0000000000000005e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  52.75 
 
 
224 aa  195  5.000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  53.77 
 
 
228 aa  194  7e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  54.17 
 
 
226 aa  194  7e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  54.93 
 
 
241 aa  193  2e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  56.34 
 
 
225 aa  192  3e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  55.3 
 
 
234 aa  190  2e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  52.8 
 
 
220 aa  190  2e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.39 
 
 
229 aa  189  2.9999999999999997e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  55.19 
 
 
217 aa  189  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  49.55 
 
 
234 aa  188  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  53.24 
 
 
226 aa  187  9e-47  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  50.46 
 
 
224 aa  187  1e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  52.09 
 
 
230 aa  187  1e-46  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  52.53 
 
 
223 aa  187  1e-46  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  51.83 
 
 
241 aa  186  2e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  52.61 
 
 
214 aa  185  5e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  52.36 
 
 
215 aa  185  5e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  55.09 
 
 
220 aa  184  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.61 
 
 
230 aa  184  8e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  52.36 
 
 
220 aa  184  9e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  52.86 
 
 
215 aa  184  9e-46  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  53.49 
 
 
215 aa  183  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  50.94 
 
 
221 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  51.87 
 
 
234 aa  183  2.0000000000000003e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  51.63 
 
 
230 aa  183  2.0000000000000003e-45  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  52.02 
 
 
229 aa  182  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53.24 
 
 
220 aa  183  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  52.31 
 
 
224 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  50.23 
 
 
227 aa  182  4.0000000000000006e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  55.81 
 
 
221 aa  182  5.0000000000000004e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  49.36 
 
 
250 aa  181  6e-45  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  50.47 
 
 
222 aa  181  6e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  50.7 
 
 
226 aa  181  7e-45  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.77 
 
 
221 aa  181  1e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.63 
 
 
239 aa  180  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  47.44 
 
 
225 aa  179  2.9999999999999997e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  49.77 
 
 
224 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  179  4e-44  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  49.3 
 
 
223 aa  178  4.999999999999999e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  47.49 
 
 
230 aa  178  4.999999999999999e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  52.11 
 
 
217 aa  178  4.999999999999999e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  51.64 
 
 
215 aa  178  5.999999999999999e-44  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  51.14 
 
 
234 aa  178  7e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  178  7e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  46.54 
 
 
218 aa  178  7e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  50.24 
 
 
221 aa  177  8e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  51.85 
 
 
223 aa  177  1e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  54.46 
 
 
225 aa  177  1e-43  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.11 
 
 
218 aa  177  1e-43  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  50.66 
 
 
242 aa  177  1e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  52.58 
 
 
222 aa  176  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.7 
 
 
225 aa  176  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  51.87 
 
 
226 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  51.14 
 
 
230 aa  176  2e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  52.34 
 
 
221 aa  176  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  52.34 
 
 
223 aa  176  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  50 
 
 
226 aa  175  4e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  52.13 
 
 
217 aa  174  7e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  49.54 
 
 
232 aa  174  8e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  51.39 
 
 
219 aa  174  9e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52.09 
 
 
227 aa  174  9e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  52.58 
 
 
233 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  50 
 
 
223 aa  174  9.999999999999999e-43  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  48.15 
 
 
215 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  49.11 
 
 
235 aa  172  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  50.89 
 
 
244 aa  173  1.9999999999999998e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  51.39 
 
 
225 aa  173  1.9999999999999998e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  49.53 
 
 
232 aa  173  1.9999999999999998e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  52.05 
 
 
229 aa  172  2.9999999999999996e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  46.26 
 
 
215 aa  172  2.9999999999999996e-42  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  48.39 
 
 
218 aa  172  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.34 
 
 
218 aa  171  5.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  52.78 
 
 
215 aa  171  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  171  7.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  52.31 
 
 
224 aa  171  9e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  49.06 
 
 
215 aa  170  1e-41  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  47.93 
 
 
223 aa  170  1e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.2 
 
 
223 aa  170  1e-41  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  51.4 
 
 
222 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  47.91 
 
 
226 aa  170  2e-41  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  44.81 
 
 
218 aa  169  2e-41  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  50 
 
 
219 aa  169  3e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  53.05 
 
 
230 aa  169  3e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
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