| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2509 |
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| Symbol | |
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| ID | 4477560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2999802 |
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| End bp | 3000437 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727107 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_870144 |
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| Protein GI | 117920952 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.592216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000482381 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAAAA TATTACATTG GATTGTAGTG TCAAGATCGC AAGTTCTGAT GGAATTGCTG
GCCGGACGCT GGCCGCAGGA GTTTCTCGTT AAGCTGTCGC AAGTCAGCCC GGATGAGATG
TGCGATCAAA TCAAAGATAA CCAAGCCTCT ATGGTGGTGA TTGATCTTTC CACCGTCGAT
CTTCAAAAAG CCTATCAATT TCAACGCTTG CTTGCCCGCG AACATCCGAG TGTGCGAGTT
GTTTATATCC AGTTCCCTAA ACAAGTTGAT GCCCGCTTCT TAATGCAAGC CTCGACCACA
GCAGGGGTGT TTTATCTGGA TGCAGGATTG ACTGAAATCA GCCTTGGCCT CTCCAACATC
TTGCGCGGAC ACAGAGTGAT CCCTATCCAA TTGGTGAATG GGGTGAATGA TGACTTTGGA
CTATTCGAAG ATACCGAGCC ATTGACCATC CGTGAGCGTG AAGTGTTACA AGCACTGCTG
TCTGGCAGCA CTAACCTCGA TATCGCCAAT CAATTGTTTG TCAGTGAGAG CACCATTAAG
ACGCACTTAT ACCGTGTATT CCGTAAGATT GGTGTGTCGA GCCGTGGTCA AGCCATCGCG
TGGGCGCAAA CCTATTTACA CGATGTGGTG GTGTAA
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| Protein sequence | MFKILHWIVV SRSQVLMELL AGRWPQEFLV KLSQVSPDEM CDQIKDNQAS MVVIDLSTVD
LQKAYQFQRL LAREHPSVRV VYIQFPKQVD ARFLMQASTT AGVFYLDAGL TEISLGLSNI
LRGHRVIPIQ LVNGVNDDFG LFEDTEPLTI REREVLQALL SGSTNLDIAN QLFVSESTIK
THLYRVFRKI GVSSRGQAIA WAQTYLHDVV V
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