More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_2442 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_2442  response regulator receiver protein  100 
 
 
292 aa  609  1e-173  Magnetococcus sp. MC-1  Bacteria  normal  0.0259595  normal 
 
 
-
 
NC_008576  Mmc1_1537  response regulator receiver protein  42.32 
 
 
311 aa  229  4e-59  Magnetococcus sp. MC-1  Bacteria  normal  0.376192  normal 
 
 
-
 
NC_007298  Daro_0110  response regulator receiver  38.36 
 
 
296 aa  224  1e-57  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0241  response regulator receiver protein  38.93 
 
 
309 aa  214  1.9999999999999998e-54  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2440  response regulator receiver protein  37.46 
 
 
310 aa  192  4e-48  Magnetococcus sp. MC-1  Bacteria  normal  0.814806  normal 
 
 
-
 
NC_007925  RPC_4510  response regulator receiver domain-containing protein  34.01 
 
 
310 aa  159  4e-38  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.078722 
 
 
-
 
NC_007520  Tcr_0195  response regulator receiver domain-containing protein  32.19 
 
 
300 aa  158  1e-37  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0280  hypothetical protein  35.23 
 
 
287 aa  119  6e-26  Maricaulis maris MCS10  Bacteria  normal  0.0146684  normal 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  48.33 
 
 
328 aa  103  3e-21  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_007955  Mbur_0825  response regulator receiver  41.41 
 
 
204 aa  100  2e-20  Methanococcoides burtonii DSM 6242  Archaea  normal  0.751719  n/a   
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  41.3 
 
 
328 aa  100  4e-20  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  43.55 
 
 
338 aa  99.4  7e-20  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4560  histidine kinase  32.26 
 
 
1313 aa  97.8  2e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.498007  normal  0.022289 
 
 
-
 
NC_013132  Cpin_3745  response regulator receiver sensor signal transduction histidine kinase  31.98 
 
 
1010 aa  97.1  3e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.412805  hitchhiker  0.00597184 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  37.09 
 
 
349 aa  96.3  5e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  40.16 
 
 
619 aa  95.9  7e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_011666  Msil_2002  two component transcriptional regulator, LuxR family  40.48 
 
 
306 aa  95.1  1e-18  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  43.33 
 
 
331 aa  95.1  1e-18  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  40.85 
 
 
414 aa  94.4  2e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_25160  response regulator  41.67 
 
 
356 aa  94.4  2e-18  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  34.48 
 
 
305 aa  94  3e-18  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  46.6 
 
 
337 aa  93.6  3e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  38.78 
 
 
376 aa  94  3e-18  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_011146  Gbem_2025  response regulator receiver sensor signal transduction histidine kinase  35.54 
 
 
452 aa  93.6  3e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  41.54 
 
 
309 aa  94  3e-18  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  40 
 
 
222 aa  93.2  4e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  41.86 
 
 
358 aa  93.6  4e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1708  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.6 
 
 
869 aa  93.2  5e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  46.6 
 
 
306 aa  92.8  6e-18  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_012918  GM21_2194  response regulator receiver sensor signal transduction histidine kinase  34.71 
 
 
452 aa  92.8  6e-18  Geobacter sp. M21  Bacteria  n/a    normal  0.514859 
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  36.69 
 
 
345 aa  92.4  7e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  36.5 
 
 
322 aa  92.4  7e-18  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  38.64 
 
 
297 aa  92  9e-18  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  39.69 
 
 
337 aa  92.4  9e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_002978  WD0221  response regulator PleD  43.22 
 
 
460 aa  91.7  1e-17  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  33.51 
 
 
383 aa  91.7  1e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  38.64 
 
 
407 aa  91.7  1e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  38.84 
 
 
305 aa  91.7  1e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.536368 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  33.51 
 
 
383 aa  91.7  1e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  42.52 
 
 
331 aa  92  1e-17  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  40.5 
 
 
312 aa  91.7  1e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  41.67 
 
 
333 aa  91.7  1e-17  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  46.3 
 
 
395 aa  91.3  2e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  30.77 
 
 
397 aa  90.9  2e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  35.62 
 
 
204 aa  91.3  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  40.83 
 
 
309 aa  91.3  2e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  42.97 
 
 
452 aa  90.9  2e-17  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_012560  Avin_29300  Response regulator  38.76 
 
 
310 aa  91.3  2e-17  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  32.24 
 
 
314 aa  91.7  2e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  42.02 
 
 
308 aa  90.5  3e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  39.55 
 
 
308 aa  90.5  3e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  39.17 
 
 
302 aa  90.5  3e-17  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  39.84 
 
 
331 aa  90.5  3e-17  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  40.46 
 
 
440 aa  90.5  3e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  40.5 
 
 
301 aa  90.1  3e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  40.62 
 
 
386 aa  90.5  3e-17  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  38.35 
 
 
338 aa  90.1  4e-17  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  41.53 
 
 
457 aa  90.1  4e-17  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  38.35 
 
 
338 aa  90.1  4e-17  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  38.35 
 
 
338 aa  90.1  4e-17  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  38.35 
 
 
338 aa  90.1  4e-17  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2107  two component transcriptional regulator, AraC family  39.13 
 
 
1349 aa  89.7  5e-17  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.000288147  normal  0.419692 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  39.86 
 
 
488 aa  89.7  5e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_014148  Plim_2329  response regulator receiver  26.33 
 
 
301 aa  89.7  5e-17  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.25746  n/a   
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  40.34 
 
 
305 aa  89.4  6e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  45.63 
 
 
437 aa  89.4  7e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  36.17 
 
 
217 aa  89.4  7e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1432  response regulator PleD  39.83 
 
 
457 aa  89  8e-17  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  43.1 
 
 
339 aa  89  9e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  39.17 
 
 
309 aa  89  9e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal 
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  46.73 
 
 
301 aa  88.2  1e-16  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  39.13 
 
 
369 aa  88.6  1e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_011369  Rleg2_1290  response regulator PleD  43.97 
 
 
457 aa  89  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0138689  hitchhiker  0.00259394 
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  44.66 
 
 
437 aa  88.2  1e-16  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  39.23 
 
 
303 aa  88.6  1e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  34.97 
 
 
308 aa  88.2  1e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_6436  histidine kinase  37.5 
 
 
1418 aa  88.6  1e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2468  PAS/PAC sensor hybrid histidine kinase  37.12 
 
 
1049 aa  88.2  1e-16  Polaromonas sp. JS666  Bacteria  normal  0.858637  normal  0.0946099 
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  34.97 
 
 
308 aa  88.2  1e-16  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2174  hypothetical protein  28.18 
 
 
297 aa  88.2  1e-16  Maricaulis maris MCS10  Bacteria  normal  0.0803521  normal 
 
 
-
 
NC_011004  Rpal_3541  response regulator PleD  39.83 
 
 
457 aa  88.2  1e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  34.93 
 
 
204 aa  88.6  1e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000726536 
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  44.66 
 
 
300 aa  88.2  2e-16  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0962  response regulator receiver protein  41.67 
 
 
304 aa  87.8  2e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal 
 
 
-
 
NC_007517  Gmet_2308  response regulator receiver protein  38.33 
 
 
123 aa  87.8  2e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2413  response regulator PleD  40.68 
 
 
457 aa  87.8  2e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.592932  normal  0.173821 
 
 
-
 
NC_007964  Nham_2442  response regulator PleD  39.83 
 
 
457 aa  87.8  2e-16  Nitrobacter hamburgensis X14  Bacteria  normal  0.696702  n/a   
 
 
-
 
NC_013037  Dfer_0536  histidine kinase  35.4 
 
 
1324 aa  87.8  2e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0692259  normal  0.421547 
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  44.66 
 
 
300 aa  88.2  2e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  45.37 
 
 
377 aa  87.8  2e-16  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  43.1 
 
 
455 aa  87.8  2e-16  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  33.12 
 
 
370 aa  87.8  2e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1382  response regulator PleD  43.97 
 
 
457 aa  87.8  2e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.390598 
 
 
-
 
NC_009441  Fjoh_2076  histidine kinase  38.33 
 
 
1373 aa  87.8  2e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0605  adenylate/guanylate cyclase  33.51 
 
 
355 aa  88.2  2e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.657653  n/a   
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  44.34 
 
 
386 aa  88.2  2e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  45.37 
 
 
377 aa  87  3e-16  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_007005  Psyr_2939  GGDEF  39.84 
 
 
318 aa  87  3e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.417006  normal 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  40.2 
 
 
361 aa  87  3e-16  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_007958  RPD_3038  response regulator PleD  40.68 
 
 
457 aa  87  3e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.372566  normal  0.319547 
 
 
-
 
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