| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3745 |
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| Symbol | |
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| ID | 8359913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4706823 |
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| End bp | 4709855 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965914 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_003123408 |
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| Protein GI | 256422755 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.412805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00597184 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACTAA CCAAGACCGT AACCCCTGAA TTCCTCACCG GCGGCGGTGA AATGGGGGAA
TTGATTCGCT CCAGGGATTG GTCTAAAACG CCATTAGGAC CTGTTGAAGC GTGGCCTCAA
AGTTTGAAGA CCTGTGTGCG TATTATGCTT ACTTCACGGC AACCCATGTT TGTATGGTGG
GGCGGCGACC TGATTAACCT GTATAACGAT GCATATAGAA GTATTCTCGG CGGAAAACAC
CCTGCCGTGC TGGGAAGTCC TGCCAGTGAG GTATGGACGG AAATATGGGA CCAGGTAGGT
CCCAGGGCAG AAGTGTGTAT GCAGCAGAAT GTTGGCACAT ATGATGAATC ATTGCTGCTA
CTGATGGAGC GGAATGGGTA TCCTGAAGAA ACCTACTACA CGTTTTCATA TAGTCCGGTG
CCTGGAGATG AAGGCGGCAC CAGCGGTATT ATCTGCGCCA ATACTGACGA TACACAACGT
ATCCTTGGTG AAAGACAATT ACGTACGTTG AAAGATCTGG GTAGATACCT GGCGGAAGCA
AAAGATGATG CAGATGTATA TAACCGCGCT GTAGAAATAT TAAAAGAAAA CCCGGCAGAT
TTCCCTTTTG CCTGTTTTTA CGAACTCAGT ATACAGACCG GCACCCTGAA CATGACGGCG
AAAACAGATG AACTGTTGTC CACAGATATC CTGCCGCAAG AGCTTATCCT GGAGAGTACG
ATTGCTGACG ACTGGCAGTT TCCCTACGTG ATAACGCATA ACCGTGCGGC CAGGATCGAG
GAGCTTCAGG CGAAATATGG ACAACTGCCT TCTGGTTGCT GGACGATCAG TCCGGACCAG
GCACTCGTGA TTCCTGTGAT GCAAAACGGA CAGGATTGTC CTTTTGCATT GCTCATCGTA
GGTATTAATC CGCACCGGCA ACTGGATGAA AAATACACCA GTTTTTTTCA GCTGGTCGCC
GATCAGATCG CGGGTAGTAT TGTAAATGTG CATACAGTAG AAGAAGCCCG AAAAAGGGCG
GAAGCGCTGC TGGAAATAGA CCGGGCAAAA ACCGCCTTTT TCAGTAATAT CAGTCACGAG
TTCCGCACAC CATTGACGCT GATGCTGGGG CCACTGGAGG AATTGTTGTC TCAACAGGAT
GGTGTACTGA CTAAGCAGCA GGAAGCCAAT GTCACCGCTA CTCACCGTAA TGCTATGCGC
TTGCTGCGAC TGGTAAATAC GCTGCTCGAT TTCAGCCGTA TTGAAGCGGA TAAAGTCAGG
GCACAGTATT TTCCGGTAAA CCTCAGCGAC GTGACGACGG ATATCGCCAG TACGTTCAGA
GCAGCAGTGG AACATGCAGG ATTGGAATTC AATGTGACGT GTAAGGACCT CTCTATGGCT
GCTTATGTTG ACCGCGATAT GTGGGAGAAG GTTATCCTGA ATCTCTTATC CAACGCCTTT
AAATATACCT TACAGGGGAG CATCAGTGTG ATCCTGGAGG AAAGCGATCA ACACGCCATA
TTGCTTGTAC GTGATACTGG CGTAGGTATT CCGGTGTCGG AACTGCCTAA CATGTTTGAG
CGTTTCCATC GGGTAAAACA AAGTAAAGGC CGCTCCTTTG AAGGAACTGG TATCGGTCTT
TCACTCGTGC GGGAGCTGGT ACAACTGCAC AACGGCGATA TCAGTGTGGA GAGCGAGGAA
GGGAAAGGCA GTACGTTTGC CGTAAAGATA CCGCTGGGAA GAGCGCATTT GCCGGAAGAG
CAGGTGGTAG AAAATGCAGG TGCAGGTACT AACCAGACAC CCGGACTTAG TGCCGCTTAT
GTCAATGAGG CCATGTATTT CAACCGCCAG CAGGATAGCA ATGGCATCGA TATCGATAGG
ATTGAAGAAG GAGAAGAAAG AGCGCGTGTC CTGATCGTGG ATGATAATGC TGATATGCGC
GACTATCTGC AACGCCTGCT TGAAAAACAA TATTACATCG AAACAGCCGC CAACGGAAAA
CTGGCGCTGG AAAAGATAGC AACACATCAG CCTGAACTGA TCATCAGTGA TGTGATGATG
CCGGAAATGG ATGGTATCGA ACTGTTGCAT CATGTAAAAC ATAACCCTGC AACGGAGTCA
TTACCAGTGA TCCTGGTGTC TGCCAGGGCA GGTGAGGAAG CGACTATTGA AGGCTATGAT
ATTGGTGCGG ATGATTACCT GACAAAACCA TTTTCCGCCA AAGAATTACA GGCAAGGGTA
CGTGCACAGA TCAGGGTATC CCGGCTGCAC CGACATGCGC TGGACATCTT ACAACATAGT
GCAGAGGAAC TGGAAAAGAA GGTAGAAGCA CGTACTTCTG AGCTATTACG AAAAAACTCG
GAACTGGAGC AGTTTGCCTA TATCGCCAGT CATGATTTGC AGGAACCACT ACGTAAGATC
AGAACCTTCT CTGAGTTGTT GCAGAAAAGT CTGCAGAAAG GGAATCCCGT TAATAATTAC
TTTGATAAGA TCCAGTCATC CGCAGAAAGG ATGACGCAAC TGATCAAAGA CGTGCTGGAT
TATTCCCGTC TCTCCAACAC GGAAGAGAAG TTTGTTCCGA TCGATCTGAA CACGATATTA
CAACAGGTAA AAGGCGATTT TGACCTGCTG ATAGAGCAGA AACAGGCGAC TATAAAAAGC
AATACGCTGC CGGTGGTCAA AGGTATTCCT TTACAGCTTC AGCAGCTCTT TACCAACTTA
ATAGGTAACT CGCTCAAATT CTGTGAAAAT CAGCCACTTA TAAGTATTTT CGCATCACCA
CTACCGGCGC CGGAAATACC GTTTTATCCG GGCTTACAGG AGGATATTTC TTATGTAAAA
CTGGAGTTTT CTGATAACGG AATCGGTTTT GAACAGCAGT TTGCCGAAAG GATATTTGCC
ATCTTCCAGC GATTGAATGA ACGGAAGGTA TATGCCGGTA CGGGTATCGG GCTGGCACTC
TGTAAGAAGA TCGTAGAGAA TCATCATGGG ATCATCAGGG CGAATGGAAA GCTGAATGAA
GGCGCTACAT TTACAGTGAT ACTACCTGCT TAA
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| Protein sequence | MELTKTVTPE FLTGGGEMGE LIRSRDWSKT PLGPVEAWPQ SLKTCVRIML TSRQPMFVWW
GGDLINLYND AYRSILGGKH PAVLGSPASE VWTEIWDQVG PRAEVCMQQN VGTYDESLLL
LMERNGYPEE TYYTFSYSPV PGDEGGTSGI ICANTDDTQR ILGERQLRTL KDLGRYLAEA
KDDADVYNRA VEILKENPAD FPFACFYELS IQTGTLNMTA KTDELLSTDI LPQELILEST
IADDWQFPYV ITHNRAARIE ELQAKYGQLP SGCWTISPDQ ALVIPVMQNG QDCPFALLIV
GINPHRQLDE KYTSFFQLVA DQIAGSIVNV HTVEEARKRA EALLEIDRAK TAFFSNISHE
FRTPLTLMLG PLEELLSQQD GVLTKQQEAN VTATHRNAMR LLRLVNTLLD FSRIEADKVR
AQYFPVNLSD VTTDIASTFR AAVEHAGLEF NVTCKDLSMA AYVDRDMWEK VILNLLSNAF
KYTLQGSISV ILEESDQHAI LLVRDTGVGI PVSELPNMFE RFHRVKQSKG RSFEGTGIGL
SLVRELVQLH NGDISVESEE GKGSTFAVKI PLGRAHLPEE QVVENAGAGT NQTPGLSAAY
VNEAMYFNRQ QDSNGIDIDR IEEGEERARV LIVDDNADMR DYLQRLLEKQ YYIETAANGK
LALEKIATHQ PELIISDVMM PEMDGIELLH HVKHNPATES LPVILVSARA GEEATIEGYD
IGADDYLTKP FSAKELQARV RAQIRVSRLH RHALDILQHS AEELEKKVEA RTSELLRKNS
ELEQFAYIAS HDLQEPLRKI RTFSELLQKS LQKGNPVNNY FDKIQSSAER MTQLIKDVLD
YSRLSNTEEK FVPIDLNTIL QQVKGDFDLL IEQKQATIKS NTLPVVKGIP LQLQQLFTNL
IGNSLKFCEN QPLISIFASP LPAPEIPFYP GLQEDISYVK LEFSDNGIGF EQQFAERIFA
IFQRLNERKV YAGTGIGLAL CKKIVENHHG IIRANGKLNE GATFTVILPA
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