| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6436 |
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| Symbol | |
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| ID | 8730220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7801910 |
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| End bp | 7806166 |
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| Gene Length | 4257 bp |
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| Protein Length | 1418 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003391192 |
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| Protein GI | 284041262 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGT GGGTTTTTCT CAACGTTTGT TGTTTTTGGT GCATTTTTCT GATTTCCCCG
GCCTGTTTGG CGCAACGGGA GCCGGACCAG TTTCAGTTTC AGCATATTAC CGTCGATGAA
GGCTTGTCGC ACAGCGATGC CATGTGCGTT ACGCAGGACA AAGGCGGATT TATCTGGATA
GGGACTAACA AAGGCATTAA CCGGTACGAC GGCTACAGCC TGAAAAAATA CGAACTGCCC
ATCAATGATC AGGACGGCAT TTCCAGCAAC CGGATACGGG CACTCGAAAT AGACCGGCAG
GGAATGTTGT GGGTAGGGGT GGAGCGGTCG GGCGTGTTCT GGTACGACCC CGCCCATGAC
CGATTCGTGA GTATTCGCGA ACGGGCCGGT GCCGCTAACT TTGGCCCGTA TCTTCACCAA
CTGACCCATA CCAACGTACA CGCTATACGG GCCGATCAAC AGAACCGCAT CTGGGTGGCT
ACCCAACATT ATGGGGTTTT TGTGCTGCAA ACCGATGGGC AAGGCAAACT CAGTGATATC
CGGCAGATCG CGATTACCAA CCGCTCGAAA GCCGAGCCGC TCGTCAATAA ACTGGCGGTC
GACCACCGCG GCCGAGTCTG GATCGGCACC CTGGGCGAAG GACTCTGGGT CTTTGACGGA
AACGGATCAC TTCGGTCGAA AGCACCGTTG CGGGCGAGTC CGGTGCCCGC ATTTTCGGAA
ACCAACATCA GAGCCCTGCA CCTCGATATC CGGGGCGACT TATGGATTGG AACCGACAGT
CAGATTTTCT GGCTAAGCCG CCAGGGGCTA TCCAATTCTC CCGGCATACC GCCCCAACCC
CTGCAAAGAA CGTTTGCGGC TATCGAAAAC CTATTTCTGG ACTCCTCGAA GCGGTTATGG
ATCAGTACCA ATTACGGGTT ACTGCTCATG AGTGCCGGAA CGGAAAAGGA GATGAGACCT
CCCGTTGATG AGCGGGCGAT CCGGACGTTT CTGCCGCTGG ATACCGACCC CGCCAGTATC
AACTCCGTTC GGGTACACGA CCTGTTGGAA GATCGGTTTC ATAACCTTTG GCTGGCCACA
TCGGCCGGGG GGCTGAACCG GCTTCAACTG CGGCCAAAGC CATTTGGGCA AATCCGGCGG
CAAATGGTGG GGCAAACGAC CCCCGCCAAC AATTACATCA ACACCATCTG GAAAGACGAA
AAAAATAACC AGCTCTGGAT GGGTACGCGA AATGGCTTTG CCAGCTATGA TCTCAGCCGA
AAAACCTACC GGAATTACCT CAACCGTGCC CTCTCCGGTG ATGTCAACGG GATCGACGTG
GCTACGCTGT TTCAGGCAAC CGACGGTACC CTCTGGATTG GCACCCGCTA TTATGGGTTG
TATACGCTGA AGGGTCCGGC GGGGGCTGTG CCCAACCGGT TGCCCGCAGT TTCGGGTATG
CCGGATCTGA GTAATACCAG CATTGAGAGT ATTGTCGAAG ATCGACACGG GACCATTTGG
GTCGCCACGT TCAGCGCGGG AATACACCAG TTTACCCGAC AGGGGCAGTA TCTTAAAACC
TACGATACAC TTCACCACGC CTTACCCACT CACCAGTTTA CGACCCTGCT ATATGAGACA
GAAACCGATG TTTTATGGGC CAGTACACGA GATGCCGGTG TACTGAAAAT ACAGATTTCG
CCAACGGGCC TGCACCTGCT CAACCAGTTT AAACACGAAC CCCACAACCC CAACAGCCTG
CAAACCAATT ATGCCTGGCC GCTGCTCAAA GACCGGCAGG GAACACTTTG GATTGGCACC
ATTGGCGGGG GATTGCACCG GCTTACGAAG AATGCCGCCG GTAAAGAGGT GATAGACCGG
TATAGCCGGT GGGTGCCCGA AACGGATGTG GAAAGTCTGT TGACGGATGA GGCCGGGAAC
CTCTGGATTG GTGGTGCCGG ACTGTACAAA TTCAACCCGG CCAGTAAACG GCTGTTTCAT
TACGACGTAA CGGACGGGCT GCAAAGTAAT TCGTTTAAAG TAGGGGCGGC TTATCGAGCG
GCCGATGGCA CTTTGTACGT TGGCGGCACC AATGGCATCA CCTATTTTCA ACCCCGTACG
CTGACCCCTA ATCCGTACCC GCCCCTGGTG CAGGTTACGG AGCTACGCGT TCTGAACCAG
CCCGTAGGTA TTGGCGATAC GCTGAACGGG CGAGTTTTAC TGGAAAAGCC CTACACCGAA
CCGCAAACGA TTCGGCTGGA AGCGTCGGAA AATGATTTTT CCATCGCGTT TGTCGGCCTG
AACTATGCCA ATCCGCAGAA ACAGCAGTAT ATGTACCGAC TGGTTGGGTA TAACGACGAT
TGGGTACGGG CCGCACCCGG TCAGCGGACT GCCAACTTCG CCAACCTCCC GGCGGGTGAC
TACACGTTTA TGGTGAAAGC CAGTAACGAC GACGGCATAT GGTCGGTCGA ACCGGCCTCG
CTGCAATTCA CGATTCTGCC GCCCTGGTGG CGTACCTGGT GGGCCTATTT GCTGTACGCT
GCCGCCGTTG TCGGGGTGTT CTGGTTCTAC CAGCGCAACG AACTGGCCAA GCAGGAACTG
AAAAATCGGC TGGCGCTGGA GCAGTACAAA GTCGAAAAGG AAAAGGAAGT GACCGATACC
AAACTGCGGT TTTTCACTAA TGTATCGCAC GAACTTCGCA CCCCGCTTAC GCTGATTCTG
GGACCACTGG AAGAACTGGC TTCGGCGGGG AGCGGCCCCT TATACCAGGC CAAAGACAAA
GTTATGCTCA TGCACCAGCA AACCCGAAAA CTGCTGGATC TGGTCAACCA GCTGATGGAT
TTTCGGAAGG TCGAAGCGGG CCATGTTACG TTGCGGGCCA GTCAGGGAAA CATGATGGCG
TTCCTGATGG AGATCGTTTT GATCTTCAAA CTCAAAGCCG AAGAGCTGCA ACTGGACTAT
GCCATGGAAG CCCCGGCAAC GGACATAAAC ATGTACTTCG ACCGTGGTAA AGTTGAAATA
ATTCTGACTA ACCTGCTGTC CAACGCCTTT AAGTTCACGC CGGAAGGTGG CAAAATCAGG
GTGCTCGTGT CCGTAATCGG CTCACCATCG GAACCGGCCG TTTTTCACGG AAACAGGCTG
CATACGAATT ACCTCGAGCT GGTTGTCCGC GATTGGGGTG TGGGCATGAA CTCCGATGAA
GTCGATAAAA TATTTGACCC GTACTATCAG GCATCGCATA CCGAAACGAT GCGCATGACG
GGTACGGGTA TTGGCCTGTC GCTGGTAAAG CAGTTCGTCG AAGCGCACAG AGGGGAGGTA
AGCGTGCAAA GTGCCCCCGG TGCGGGTACG ACGTTCACCC TGCGTTTGCC CTTCGGCAAG
GACCATTTAT CGCCGGAAGC TATCCGTGAC GACGCGCCCT ATACCGACGG GCCGCTGCTC
CTCACCGGCG ATACCTCGGA GGTTGCCCCG ATGGCCCGGC CCCAGGCGTC TGACCCGCCG
GTTCGCTCGG GCCGGGTGCT GCTGGTGGAA GATAACGATG AACTTCGGCA GTATGTACAG
CAACTGCTGG CTCCCACGTT TGAGGTCTCT TTGGCCGTCG ATGGTCTGGA TGGTTGGGAA
AAAACGCTCG ACCTCCTGCC CGACCTGGTC GTGAGCGACG TCATGATGCC CCGCAGCAAC
GGGCTGGAAC TGTGCCGGAA AATCAAGCAG CACCCCAAAA CCATGCACAT TCCGGTGGTG
TTGTTAACGG CCCGGGCGGC TGCGGTGCAT GAACTGGAAG GGCTGGAAAC GGGCGCTGAT
GAGTACATGG CCAAGCCGTT CAACCCCCGG CTCCTGTACA CCAAAATAGC CGTGATGCTA
CAGAGCCGCC ATCGGCTGAA AGAGTATTAC CAGCGTCAGA TTCTGCTCAA ACCCACCGAC
ATCGTTATTC CCAACGAAGA AAAACAGCTA CTGGAAAAGG CCATGGCCAT TGTTGAATCT
CATTTGGCCG ATGCCGACTT CAGCGTGCCC GTTCTGGTGC GGGAGATGGG CATGAGCCAG
TCGGCTTTCT ACCGGCAAAT CAAAACCATG ACGGGGCAGT CGGCGGTTGA ATTTATCCGG
GATGTACGGA TGAAGCGGGC GGCTCAACTG CTGTCGACAA CAACGATGCG CGTTTCGGAA
ATTGCCAATC AGGTGGGGTT CGACGATCTG AAGCATTTCC GCAAAACCTT CCAGAGTCTA
TACACCCTTT CGCCCTCGGA TTATGCCCGG CAGCACCGGC AGGGGGCGAT CAATTAA
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| Protein sequence | MMKWVFLNVC CFWCIFLISP ACLAQREPDQ FQFQHITVDE GLSHSDAMCV TQDKGGFIWI
GTNKGINRYD GYSLKKYELP INDQDGISSN RIRALEIDRQ GMLWVGVERS GVFWYDPAHD
RFVSIRERAG AANFGPYLHQ LTHTNVHAIR ADQQNRIWVA TQHYGVFVLQ TDGQGKLSDI
RQIAITNRSK AEPLVNKLAV DHRGRVWIGT LGEGLWVFDG NGSLRSKAPL RASPVPAFSE
TNIRALHLDI RGDLWIGTDS QIFWLSRQGL SNSPGIPPQP LQRTFAAIEN LFLDSSKRLW
ISTNYGLLLM SAGTEKEMRP PVDERAIRTF LPLDTDPASI NSVRVHDLLE DRFHNLWLAT
SAGGLNRLQL RPKPFGQIRR QMVGQTTPAN NYINTIWKDE KNNQLWMGTR NGFASYDLSR
KTYRNYLNRA LSGDVNGIDV ATLFQATDGT LWIGTRYYGL YTLKGPAGAV PNRLPAVSGM
PDLSNTSIES IVEDRHGTIW VATFSAGIHQ FTRQGQYLKT YDTLHHALPT HQFTTLLYET
ETDVLWASTR DAGVLKIQIS PTGLHLLNQF KHEPHNPNSL QTNYAWPLLK DRQGTLWIGT
IGGGLHRLTK NAAGKEVIDR YSRWVPETDV ESLLTDEAGN LWIGGAGLYK FNPASKRLFH
YDVTDGLQSN SFKVGAAYRA ADGTLYVGGT NGITYFQPRT LTPNPYPPLV QVTELRVLNQ
PVGIGDTLNG RVLLEKPYTE PQTIRLEASE NDFSIAFVGL NYANPQKQQY MYRLVGYNDD
WVRAAPGQRT ANFANLPAGD YTFMVKASND DGIWSVEPAS LQFTILPPWW RTWWAYLLYA
AAVVGVFWFY QRNELAKQEL KNRLALEQYK VEKEKEVTDT KLRFFTNVSH ELRTPLTLIL
GPLEELASAG SGPLYQAKDK VMLMHQQTRK LLDLVNQLMD FRKVEAGHVT LRASQGNMMA
FLMEIVLIFK LKAEELQLDY AMEAPATDIN MYFDRGKVEI ILTNLLSNAF KFTPEGGKIR
VLVSVIGSPS EPAVFHGNRL HTNYLELVVR DWGVGMNSDE VDKIFDPYYQ ASHTETMRMT
GTGIGLSLVK QFVEAHRGEV SVQSAPGAGT TFTLRLPFGK DHLSPEAIRD DAPYTDGPLL
LTGDTSEVAP MARPQASDPP VRSGRVLLVE DNDELRQYVQ QLLAPTFEVS LAVDGLDGWE
KTLDLLPDLV VSDVMMPRSN GLELCRKIKQ HPKTMHIPVV LLTARAAAVH ELEGLETGAD
EYMAKPFNPR LLYTKIAVML QSRHRLKEYY QRQILLKPTD IVIPNEEKQL LEKAMAIVES
HLADADFSVP VLVREMGMSQ SAFYRQIKTM TGQSAVEFIR DVRMKRAAQL LSTTTMRVSE
IANQVGFDDL KHFRKTFQSL YTLSPSDYAR QHRQGAIN
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