More than 300 homologs were found in PanDaTox collection
for query gene Dole_0879 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_0879  methyl-accepting chemotaxis sensory transducer  100 
 
 
633 aa  1283    Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3566  putative chemotaxis sensory transducer protein  21.91 
 
 
580 aa  68.6  0.0000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.81094  normal  0.0204442 
 
 
-
 
NC_008751  Dvul_1542  methyl-accepting chemotaxis sensory transducer  23.04 
 
 
580 aa  54.7  0.000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1419  methyl-accepting chemotaxis sensory transducer  21.78 
 
 
641 aa  54.7  0.000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5564  putative chemotaxis transducer  24.79 
 
 
657 aa  53.1  0.00001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1287  methyl accepting chemotaxis protein, putative  22.7 
 
 
627 aa  52.8  0.00002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  26.46 
 
 
565 aa  52.4  0.00002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_009483  Gura_2996  methyl-accepting chemotaxis sensory transducer  21.46 
 
 
637 aa  52.4  0.00002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00186457  n/a   
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  28 
 
 
653 aa  52.8  0.00002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2054  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
539 aa  52.4  0.00002  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  38.27 
 
 
541 aa  52.4  0.00003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_007492  Pfl01_0622  chemotaxis sensory transducer  30.71 
 
 
648 aa  52  0.00004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_64060  putative chemotaxis transducer  24.37 
 
 
657 aa  51.6  0.00004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  24.86 
 
 
563 aa  51.6  0.00004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3267  putative methyl-accepting chemotaxis sensory transducer  22.16 
 
 
581 aa  51.2  0.00005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435218 
 
 
-
 
NC_009485  BBta_3951  hypothetical protein  24.85 
 
 
420 aa  51.2  0.00006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.131979  normal  0.604734 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  32.98 
 
 
548 aa  50.8  0.00007  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  29.77 
 
 
545 aa  50.8  0.00008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  23.31 
 
 
514 aa  50.8  0.00008  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4372  methyl-accepting chemotaxis protein  29.36 
 
 
619 aa  50.4  0.0001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  26.6 
 
 
545 aa  50.1  0.0001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5094  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
659 aa  50.1  0.0001  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.298675 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
645 aa  50.4  0.0001  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  26.46 
 
 
566 aa  49.3  0.0002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  22.37 
 
 
515 aa  49.3  0.0002  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  26.67 
 
 
650 aa  49.7  0.0002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  26.17 
 
 
672 aa  49.3  0.0002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  37.04 
 
 
541 aa  49.3  0.0002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  26.72 
 
 
653 aa  49.3  0.0002  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_013522  Taci_1590  methyl-accepting chemotaxis sensory transducer  28.1 
 
 
433 aa  49.3  0.0002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1396  methyl-accepting chemotaxis sensory transducer  21.55 
 
 
583 aa  49.7  0.0002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1487  methyl-accepting chemotaxis sensory transducer  22.95 
 
 
659 aa  49.3  0.0002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000879913  normal 
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  34.52 
 
 
646 aa  49.3  0.0002  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  24 
 
 
688 aa  49.3  0.0002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0948  methyl-accepting chemotaxis sensory transducer  26.14 
 
 
667 aa  49.3  0.0002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1741  methyl-accepting chemotaxis sensory transducer  22.14 
 
 
597 aa  49.7  0.0002  Geobacter lovleyi SZ  Bacteria  normal  0.049484  n/a   
 
 
-
 
NC_008322  Shewmr7_0984  methyl-accepting chemotaxis sensory transducer  26.14 
 
 
667 aa  49.3  0.0002  Shewanella sp. MR-7  Bacteria  normal  normal  0.869835 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  25.69 
 
 
521 aa  48.5  0.0003  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
645 aa  48.5  0.0003  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_013422  Hneap_0470  methyl-accepting chemotaxis sensory transducer  29.55 
 
 
668 aa  48.9  0.0003  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  29.41 
 
 
542 aa  48.9  0.0003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  25.96 
 
 
561 aa  48.9  0.0003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  28.97 
 
 
550 aa  48.9  0.0003  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  26.4 
 
 
653 aa  48.5  0.0003  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_011899  Hore_06690  methyl-accepting chemotaxis sensory transducer  28.43 
 
 
534 aa  48.5  0.0003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0858  methyl-accepting chemotaxis sensory transducer with phytochrome sensor  36.62 
 
 
1406 aa  48.9  0.0003  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0185965  normal  0.079214 
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  28.97 
 
 
550 aa  48.9  0.0003  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
645 aa  48.5  0.0003  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  23.11 
 
 
561 aa  48.9  0.0003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
584 aa  48.9  0.0003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
563 aa  48.9  0.0003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  28.74 
 
 
617 aa  48.1  0.0004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_010501  PputW619_2319  methyl-accepting chemotaxis sensory transducer  25.37 
 
 
546 aa  48.1  0.0004  Pseudomonas putida W619  Bacteria  normal  0.217936  normal 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  38.03 
 
 
541 aa  48.5  0.0004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
545 aa  48.1  0.0004  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3808  histidine kinase, HAMP region: chemotaxis sensory transducer  28.57 
 
 
569 aa  48.1  0.0004  Ralstonia eutropha JMP134  Bacteria  normal  0.880796  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  27.27 
 
 
585 aa  48.1  0.0004  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
545 aa  48.1  0.0004  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  28.08 
 
 
522 aa  48.1  0.0004  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
545 aa  48.1  0.0004  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2397  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
686 aa  48.5  0.0004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.688228 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.67 
 
 
545 aa  48.1  0.0004  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
645 aa  48.5  0.0004  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_010322  PputGB1_3184  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
541 aa  48.5  0.0004  Pseudomonas putida GB-1  Bacteria  normal  0.799555  normal 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  30.93 
 
 
499 aa  48.5  0.0004  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0765  methyl-accepting chemotaxis sensory transducer  25.78 
 
 
528 aa  48.1  0.0004  Dickeya zeae Ech1591  Bacteria  normal  0.711695  n/a   
 
 
-
 
NC_009674  Bcer98_0849  methyl-accepting chemotaxis sensory transducer  21.99 
 
 
573 aa  48.5  0.0004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  24.02 
 
 
674 aa  48.1  0.0004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_010511  M446_4638  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.91 
 
 
493 aa  48.1  0.0004  Methylobacterium sp. 4-46  Bacteria  normal  0.246645  normal  0.228311 
 
 
-
 
NC_013512  Sdel_0016  chemotaxis sensory transducer  25.73 
 
 
357 aa  48.5  0.0004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.760621  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  25.69 
 
 
521 aa  48.1  0.0005  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  30.61 
 
 
539 aa  48.1  0.0005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.08 
 
 
522 aa  48.1  0.0005  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  30.69 
 
 
558 aa  48.1  0.0005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  22.67 
 
 
731 aa  48.1  0.0005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007953  Bxe_C0612  methyl-accepting chemotaxis sensory transducer  28.74 
 
 
539 aa  48.1  0.0005  Burkholderia xenovorans LB400  Bacteria  normal  0.60428  normal  0.0897253 
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  30.99 
 
 
550 aa  47.8  0.0006  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  22.58 
 
 
513 aa  47.8  0.0006  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  28.08 
 
 
533 aa  47.8  0.0006  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2149  methyl-accepting chemotaxis sensory transducer  30.99 
 
 
541 aa  47.8  0.0006  Pseudomonas putida F1  Bacteria  normal  0.608007  normal 
 
 
-
 
NC_010322  PputGB1_0607  methyl-accepting chemotaxis sensory transducer  32 
 
 
653 aa  47.8  0.0006  Pseudomonas putida GB-1  Bacteria  normal  normal  0.100705 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  30.61 
 
 
539 aa  47.8  0.0006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  29.41 
 
 
542 aa  47.8  0.0006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  25.35 
 
 
601 aa  47.8  0.0006  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0103  methyl-accepting chemotaxis protein  26.67 
 
 
521 aa  47.8  0.0006  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0946  methyl-accepting chemotaxis sensory transducer  25.57 
 
 
667 aa  47.8  0.0006  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  29.91 
 
 
520 aa  47.8  0.0007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010552  BamMC406_3664  methyl-accepting chemotaxis sensory transducer  23.12 
 
 
562 aa  47.4  0.0007  Burkholderia ambifaria MC40-6  Bacteria  normal  0.248385  normal  0.243257 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.4 
 
 
543 aa  47.8  0.0007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_008740  Maqu_3644  methyl-accepting chemotaxis sensory transducer  21.62 
 
 
378 aa  47.8  0.0007  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  29.41 
 
 
671 aa  47.4  0.0007  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009831  Ssed_2412  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
545 aa  47.8  0.0007  Shewanella sediminis HAW-EB3  Bacteria  normal  0.516535  hitchhiker  0.00000653474 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  24.01 
 
 
568 aa  47.8  0.0007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  28.08 
 
 
522 aa  47.4  0.0008  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  24.85 
 
 
676 aa  47.4  0.0008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_010623  Bphy_3195  methyl-accepting chemotaxis sensory transducer  26.52 
 
 
357 aa  47.4  0.0008  Burkholderia phymatum STM815  Bacteria  normal  0.0463138  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  24.71 
 
 
565 aa  47.4  0.0008  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.27 
 
 
609 aa  47.4  0.0008  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0469  methyl-accepting chemotaxis sensory transducer  22.7 
 
 
608 aa  47.4  0.0008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.149565 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25 
 
 
521 aa  47.4  0.0009  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
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