| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0858 |
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| Symbol | |
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| ID | 3774035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 855893 |
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| End bp | 860113 |
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| Gene Length | 4221 bp |
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| Protein Length | 1406 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637799274 |
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| Product | methyl-accepting chemotaxis sensory transducer with phytochrome sensor |
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| Protein accession | YP_399875 |
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| Protein GI | 81299667 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0185965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.079214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA CCCAACGCCC TGAAAGCACC CCCGCTTCCA TCAACAATCA AACGACTGAA
GCGCTGACCC CAAAACTAAA CGGTGCTGAT CAGGTGACGT CATTCACTTC GGTTGAAACG
AGTTCTCTCT CTGGCCCAGC TAACAAACCA GCGCGCACGG GACTCAAGCT CAAGTTGACC
CTGCTAGCGA TTGCTATGGG TGTCCTGCCT GTCCTAGGGG TAGGAGTCAC CGTTCATAAC
CTCGTCAACC GGTCAATTAC CGAGATGACC GAAACAAGCA GCAGTCCAAC AGCGCAGGTG
GAAGCCGACC AGCTCAAACG CAGTCTTTTC CTGACTCTGC TCTGGGGTAC CGGCTTATCA
GCCGTGGCGG TCGGCATAAT TGCAGCTGCT TTGGCCAACC GCAGTAGCCG ACGCTTGCAA
GCTGCGATCG CAGCTCTTGA AAAGCTCAGT CAAGGGGATG TGAATGTTGC CGTTGCCGAG
GATGGTGACG ATGAGATTGC CGTTTTAGGG CAAGAAATTA ACCACGCTGC CAGTCAAATT
CAAACAGCCT TAGCAACTGC AGAGGTCAGT CGGGAGCAAC AACGCTCAGA AACAGTTCGG
GTCAATCAGC TGGTCCGTGA AATTACGCTG CGGCTGATTT CTCAAGCCAA TGTGACTGAC
GTTCTGAATG TCGCAGTCCA AGAGGCTCGC GCTGCGATCG GATGTGATCG CGTGGTTGTC
TACAAGTTTG ATGAGACTTG GGCTGGAACG ATCATCGCTG AGTCGGTTGA TCCAGGATGG
CCCCAAGCTC TGCAGGTAAC CATTGATGAT CCTTGTTTCC GCAAAGATTG GGTAGCGGCC
TACGCAGCGG GTCGGGTTCA GGTCACAGCT GATATTTATG ATGCGAATTT AACTGAATGC
CATATCAAGC AACTGGAGCC GATTGCAGTT CGTGCCAACC TAGTTACCCC GATCATTGTT
GAGAGACGAC TGATTGGTCT ATTCATTGCT CACCAATGCT CTGGGCCGTA CCAGTGGAAG
CAGTTAGAAG TTGATCTCAT GACTCAGCTT GCCACACAAG TTGGCTTAGC TATGACGCGC
GCGCTGTTCC TAGAGCAGCA GGTGATTGAA GCAGAACGCG CTAAGCTTGT GCGAACCATC
ACCACAGAGC TGGTGGCTCA GGCTGATGTT GAGGGGGTGC TGAGAACAGC TGTCCAAGAA
ACTCGGAGGG CTCTCGAAGC CGACCGCGTC ATCGTTTATG AATTCGATGA GAAGTGGAGC
GGCAAAATTA TTGCGGAGTC TGGCGACCCC AATTGGCCAT CAGGACTCAA TGTTGTCATT
GACGACCCCT GTTTTCGTCG GGACTGGGTT GAAGCCTATG CGGCTGGACG CGTTCAGGCG
ACAGCAGATA TTTATAATGC AGGCCTAACC GAATGTCATA TTCAGCAACT GGAGCCCTTG
GCGGTCAAAG CCAATCTGGT TGCGCCCATT GTGGTCGAGA AAAAACTAAT CGCTCTGTTT
ATTGCCCACC AATGCTCAGG CCCAAGAGAC TGGCAGCAAT CTGAAATTGA TCTGTTCGCC
CAAATAGCCA CACAGGTCGG TTTGGCAATG ACCCGCGCGC GCTTCTTAGA ACAGCAAATT
GCTGAAGCCA ATCGGGCCAA ACTTGTGCGG TCAATTACAT CAGAGTTAGT TGCTCAAGCT
GATGTTAAGA GCGTGCTCAG AACAGCTGTT CAAGAGACTC GCCGTGCAAT CAAGGCCGAT
CGCGTTGTGG TCTATGAATT TGATGAGAAT TGGAGTGGCA AGATCGTTGC TGAGTCGAGC
GACTCTAATT GGCCAGCGGC CCTCAACGTT GTCATTGATG ACCCCTGCTT CCGTAGAGAT
TGGGTTGAAG CCTACGCGGC TGGACGCGTT CAGGCGACAG CAGATATTTA TAATGCAGGC
CTAACCGAAT GTCATATTCA GCAACTGGAG CCCTTGGCGG TCAAAGCCAA TCTGGTTGCG
CCCATTGTGG TTGAGAAAAA ACTGATTGCC TTATTCATCG CGCATCAATG TTCCGGCCCA
CGCAATTGGC AACAGTCTGA AATTGATCTC TTTAGTCAGC TCGCGACACA AGTTGGTTTG
GCAACGACTC GGGCTCGTTT CCTTGAGCAA CAAGTGTCAG AGGTCAACCG TGCCAAACTA
GTTCGAGACA TCACCTCACA GCTCGTTTCT CCTACAAACG TTGCAAGTGT CTTGCAACTA
GCGGTACACG CGACTCGTCG TGCACTCGAT ACTGATCGCG TTGTTGTCTA CGAATTTGAC
AGTACTTGGG CTGGTACAGT AACCGCTGAG TCGGTTAACC CTTCTTGGCC TTCTGCCCTC
AATGTCACGA TTGATGACCC TTGCTTCCGA CGCGATTGGG TGGATGCCTA TGCTGCAGGT
CGAATTCAAG CGACTCCAGA CATCTACAAT GCAGGCCTCA CAGAATGCCA TCTCAAACAA
CTGGAGCCCT TGGCAGTCAA AGCCAATCTG GTTGCCCCAA TTGTGGTTGA GAAAAAACTA
ATTGCTTTGT TTGTTGCTCA TCAATGTTCA GGGCCACGTA ACTGGCAGCG ATCTGAGATT
GATCTGTTTA GTCAGCTAGC AACGCAACTA GGGTTGGCAA TTACCCGCGC CCGTTTCCTT
GAGCAACAGG TTACAGAGGC AAAACGGGCA GAGCAAATCC GCGAAATTAC CTCCAGATTA
GTTGCGCAAG CTAATCCTGA AGATGTGCTT CAAACTGCAG TGAAAGAGAC TCGCCGTGCG
CTCGCTACCG ATCGCGTTGT GGTCTATGCC TTCGATGAAA CTTGGTCAGG TACTGTGATT
GCAGAGTCAG TTGAATATGG CTGGCCCTCA GCACTGAGTA TCACGATCGA TGACCCCTGC
TTCAGACGGG ATTGGGTAGA TGCCTATGCT GCAGGCCGCA TTCAGGCGAC TCCTGATATT
TACAATGCTG GATTTACGGA ATGCCATCTC AAGCAATTGG AGCCTTTGGC AGTCAAGGCC
AATCTGGTGG CCCCGATTGT GGTTGAGAAA AAACTGATTG CCCTGTTTGT TGCTCACCAA
TGTTCAGGAG CACGAGATTG GCAGCAATCT GAAATTGATT TGTTTAGCCA ACTCGCCACG
CAAATTGGCT TAGCCTTAGC GCGTGCAGAT TTTCTACAGC AAGCTGAAAC AGCACGCGAT
CGCGCTGAGC AACTGGCACA AGAGCAACAG CAACGGACCG AAGCGATTCA AGCCGAACTG
ATTCAACTTC TCAGTGATGT CGAAGATGCA TCACGAGGTG ATCTCACTGT TCGTGCTGAC
ATCTCAGCCG GTGAAATTAG TACAGTTGCT GATATTTTCA ACTCTCTGAT TGAAAGTTTG
CGAGCCGTCG TAGTCCAAGT AAAAGCCTCC ACTCAGAAGG TGAATACTTC TCTGGATAGC
GATGCTAACT CGATGCAACG ACTAGCAGCA GACTCCCAAA GTCAGGCAGA AAAGATTAAA
AAGACCCTAA ATGCTGTTGC TGAGATGTCG AAATCAATTC TTGATGTCTC GAACACAGCA
AACCAAGCTG CTGAAGTTGC ACGCAAATCA TCGCAAACAG CTATCAGTAG TGGTCAAACA
ATGGATGAGA CTGTTCGCAG TATTCTTCAT CTACGCGAAA CTGTTGCTGA AACTGCTAAG
AAGGTGAAGC GGCTCGGTGA ATCTTCTCAA CAGATCTCAA AAGTGATCTC GTTGATTAAC
CAAATTGCTC TGCAAACAAA TCTACTTGCA ATTAATGCCA GTATTGAGGC GGCACGAGCT
GGTGAAGAAG GTCGTGGCTT TGCAGTCGTT GCAGAAGAGG TTGGCCAGTT AGCAACACGG
TCCGCTAACG CTACCAAGGA AATTGAGCAG ATTGTTGAAA CGATTCAGCA AGAAACGAAT
GAGGTGGTTA CGGCTATGGA AACAGGTACC AGCCAAGTAG TCGAGGGAAC ACAGCTGGTC
GAGGCGACTA AGAAAAGCCT TGAAGAAATC GTGCAGGTTT CCCAACAGAT TGACCAACTT
GTACAGGCAA TCTCGCAAGC AACCGTCAGC CAGTCTCAGA CCTCTAATGT TGTGACTAAC
CTCATGGAGG AGATGGCCGG TTTCTCAGAG GAAATTTCAG ACACCTCCCG TCACATTTCC
GCTTCACTAC AGGCTACTGT GGCTGTCGCT CAGAAACTTA AATCCTCCGT TGACACCTTT
AGAGTCGGAG CTGAGGAATA G
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| Protein sequence | MSTTQRPEST PASINNQTTE ALTPKLNGAD QVTSFTSVET SSLSGPANKP ARTGLKLKLT
LLAIAMGVLP VLGVGVTVHN LVNRSITEMT ETSSSPTAQV EADQLKRSLF LTLLWGTGLS
AVAVGIIAAA LANRSSRRLQ AAIAALEKLS QGDVNVAVAE DGDDEIAVLG QEINHAASQI
QTALATAEVS REQQRSETVR VNQLVREITL RLISQANVTD VLNVAVQEAR AAIGCDRVVV
YKFDETWAGT IIAESVDPGW PQALQVTIDD PCFRKDWVAA YAAGRVQVTA DIYDANLTEC
HIKQLEPIAV RANLVTPIIV ERRLIGLFIA HQCSGPYQWK QLEVDLMTQL ATQVGLAMTR
ALFLEQQVIE AERAKLVRTI TTELVAQADV EGVLRTAVQE TRRALEADRV IVYEFDEKWS
GKIIAESGDP NWPSGLNVVI DDPCFRRDWV EAYAAGRVQA TADIYNAGLT ECHIQQLEPL
AVKANLVAPI VVEKKLIALF IAHQCSGPRD WQQSEIDLFA QIATQVGLAM TRARFLEQQI
AEANRAKLVR SITSELVAQA DVKSVLRTAV QETRRAIKAD RVVVYEFDEN WSGKIVAESS
DSNWPAALNV VIDDPCFRRD WVEAYAAGRV QATADIYNAG LTECHIQQLE PLAVKANLVA
PIVVEKKLIA LFIAHQCSGP RNWQQSEIDL FSQLATQVGL ATTRARFLEQ QVSEVNRAKL
VRDITSQLVS PTNVASVLQL AVHATRRALD TDRVVVYEFD STWAGTVTAE SVNPSWPSAL
NVTIDDPCFR RDWVDAYAAG RIQATPDIYN AGLTECHLKQ LEPLAVKANL VAPIVVEKKL
IALFVAHQCS GPRNWQRSEI DLFSQLATQL GLAITRARFL EQQVTEAKRA EQIREITSRL
VAQANPEDVL QTAVKETRRA LATDRVVVYA FDETWSGTVI AESVEYGWPS ALSITIDDPC
FRRDWVDAYA AGRIQATPDI YNAGFTECHL KQLEPLAVKA NLVAPIVVEK KLIALFVAHQ
CSGARDWQQS EIDLFSQLAT QIGLALARAD FLQQAETARD RAEQLAQEQQ QRTEAIQAEL
IQLLSDVEDA SRGDLTVRAD ISAGEISTVA DIFNSLIESL RAVVVQVKAS TQKVNTSLDS
DANSMQRLAA DSQSQAEKIK KTLNAVAEMS KSILDVSNTA NQAAEVARKS SQTAISSGQT
MDETVRSILH LRETVAETAK KVKRLGESSQ QISKVISLIN QIALQTNLLA INASIEAARA
GEEGRGFAVV AEEVGQLATR SANATKEIEQ IVETIQQETN EVVTAMETGT SQVVEGTQLV
EATKKSLEEI VQVSQQIDQL VQAISQATVS QSQTSNVVTN LMEEMAGFSE EISDTSRHIS
ASLQATVAVA QKLKSSVDTF RVGAEE
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