More than 300 homologs were found in PanDaTox collection
for query gene Gobs_1986 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  100 
 
 
226 aa  448  1e-125  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  64.84 
 
 
225 aa  265  5e-70  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  63.3 
 
 
216 aa  253  2.0000000000000002e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  59.36 
 
 
228 aa  242  3e-63  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  57.99 
 
 
217 aa  233  2.0000000000000002e-60  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  59.17 
 
 
245 aa  231  9e-60  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  59.26 
 
 
227 aa  228  4e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  55.91 
 
 
232 aa  225  5.0000000000000005e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  55.51 
 
 
220 aa  222  4e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  55.8 
 
 
222 aa  220  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  54.75 
 
 
217 aa  219  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.97 
 
 
230 aa  218  5e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  56.05 
 
 
229 aa  218  7e-56  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  57.21 
 
 
221 aa  213  9.999999999999999e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  52.29 
 
 
212 aa  211  4.9999999999999996e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.38 
 
 
222 aa  210  2e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  52.34 
 
 
250 aa  210  2e-53  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  55.25 
 
 
229 aa  209  3e-53  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  53.6 
 
 
229 aa  209  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  52.75 
 
 
215 aa  203  2e-51  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  51.15 
 
 
230 aa  201  8e-51  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  50.68 
 
 
219 aa  197  9e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.72 
 
 
247 aa  194  9e-49  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  48.86 
 
 
219 aa  194  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  53.64 
 
 
220 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  46.33 
 
 
225 aa  191  5e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  46.79 
 
 
241 aa  191  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  53.27 
 
 
223 aa  191  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  47.09 
 
 
234 aa  187  1e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  49.08 
 
 
215 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  48.18 
 
 
222 aa  185  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  46.46 
 
 
225 aa  185  5e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  47.03 
 
 
225 aa  185  5e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  46.15 
 
 
239 aa  184  7e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.58 
 
 
228 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  47.22 
 
 
214 aa  182  3e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.66 
 
 
224 aa  182  4.0000000000000006e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  46.64 
 
 
225 aa  182  5.0000000000000004e-45  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  47.96 
 
 
222 aa  181  7e-45  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013093  Amir_4995  two component transcriptional regulator, LuxR family  49.54 
 
 
218 aa  179  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  45.41 
 
 
215 aa  179  2.9999999999999997e-44  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  46.64 
 
 
224 aa  179  2.9999999999999997e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  49.31 
 
 
213 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  45.37 
 
 
224 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  45.95 
 
 
225 aa  179  2.9999999999999997e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  43.56 
 
 
231 aa  178  4.999999999999999e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  45.91 
 
 
215 aa  176  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.59 
 
 
226 aa  176  2e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  45.45 
 
 
221 aa  176  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  44.04 
 
 
220 aa  176  3e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  45.21 
 
 
224 aa  176  3e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  39.42 
 
 
248 aa  175  4e-43  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  47.49 
 
 
215 aa  175  5e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  46.33 
 
 
226 aa  174  7e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  48.17 
 
 
232 aa  174  8e-43  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.05 
 
 
239 aa  174  8e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  46.79 
 
 
220 aa  174  8e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.06 
 
 
226 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  45.21 
 
 
218 aa  174  9.999999999999999e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  46.15 
 
 
229 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  45.66 
 
 
218 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  45.05 
 
 
227 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  51.39 
 
 
215 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  45.41 
 
 
221 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.95 
 
 
218 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  43.58 
 
 
218 aa  172  3.9999999999999995e-42  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  45.25 
 
 
228 aa  172  3.9999999999999995e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  46.12 
 
 
241 aa  172  3.9999999999999995e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  42.27 
 
 
230 aa  172  3.9999999999999995e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  44.8 
 
 
226 aa  172  5e-42  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  44.04 
 
 
216 aa  172  5e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  46.36 
 
 
222 aa  171  5.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  42.99 
 
 
225 aa  171  6.999999999999999e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  43.84 
 
 
218 aa  170  1e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  46.33 
 
 
225 aa  171  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  42.41 
 
 
233 aa  170  1e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  46.82 
 
 
217 aa  171  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  44.84 
 
 
226 aa  170  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  41.35 
 
 
250 aa  170  2e-41  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  43.18 
 
 
228 aa  170  2e-41  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  44 
 
 
225 aa  170  2e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  46.05 
 
 
213 aa  170  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  43.38 
 
 
215 aa  169  3e-41  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  42.79 
 
 
224 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  44.5 
 
 
214 aa  169  4e-41  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  42.06 
 
 
228 aa  169  4e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  44.86 
 
 
219 aa  168  5e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  44.04 
 
 
220 aa  168  6e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  36.55 
 
 
261 aa  168  6e-41  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.91 
 
 
219 aa  168  7e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  43.26 
 
 
213 aa  168  7e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  42.41 
 
 
230 aa  168  7e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1617  two component transcriptional regulator, LuxR family  44.34 
 
 
214 aa  168  7e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.321528  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.75 
 
 
225 aa  168  8e-41  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  46.15 
 
 
220 aa  167  8e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.14 
 
 
229 aa  168  8e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  45 
 
 
214 aa  167  9e-41  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  43.44 
 
 
225 aa  167  9e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_014151  Cfla_0857  two component transcriptional regulator, LuxR family  45.25 
 
 
219 aa  167  9e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0762303  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.63 
 
 
230 aa  167  9e-41  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
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