More than 300 homologs were found in PanDaTox collection
for query gene Xcel_0138 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_0138  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  437  9.999999999999999e-123  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.84841  n/a   
 
 
-
 
NC_014151  Cfla_0681  two component transcriptional regulator, LuxR family  48.13 
 
 
223 aa  191  6e-48  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000015615 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  33.8 
 
 
217 aa  96.3  3e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  33.95 
 
 
216 aa  96.7  3e-19  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.55 
 
 
213 aa  93.2  2e-18  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.03 
 
 
217 aa  92.4  4e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  33.8 
 
 
214 aa  88.2  1e-16  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  33.8 
 
 
214 aa  88.2  1e-16  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  33.96 
 
 
211 aa  85.5  5e-16  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  31.92 
 
 
208 aa  84.7  9e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  32.24 
 
 
214 aa  84.7  0.000000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  30 
 
 
226 aa  83.6  0.000000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  29.36 
 
 
244 aa  83.2  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.322421 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  35.48 
 
 
226 aa  83.6  0.000000000000002  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  32.88 
 
 
212 aa  83.2  0.000000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  28.9 
 
 
216 aa  82  0.000000000000007  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  33.33 
 
 
224 aa  81.6  0.000000000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_008578  Acel_0518  two component LuxR family transcriptional regulator  34.26 
 
 
225 aa  81.3  0.00000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.665179 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  32.14 
 
 
220 aa  81.3  0.00000000000001  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  31.12 
 
 
213 aa  80.5  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  27.27 
 
 
216 aa  80.1  0.00000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  31.13 
 
 
231 aa  79.7  0.00000000000003  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  30.19 
 
 
231 aa  79.7  0.00000000000003  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  32.43 
 
 
209 aa  79.7  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  28.96 
 
 
210 aa  79.3  0.00000000000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  31.51 
 
 
219 aa  79.3  0.00000000000004  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  32.35 
 
 
221 aa  79.3  0.00000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.72 
 
 
213 aa  79.3  0.00000000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  28.96 
 
 
210 aa  79.3  0.00000000000004  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.147525 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  30.54 
 
 
224 aa  79  0.00000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  32.06 
 
 
209 aa  79.3  0.00000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  28.84 
 
 
213 aa  79  0.00000000000006  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1820  two component transcriptional regulator, LuxR family  32.18 
 
 
216 aa  79  0.00000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.677493  normal  0.0923177 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  29.11 
 
 
218 aa  78.6  0.00000000000006  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  30.33 
 
 
209 aa  78.6  0.00000000000006  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  27.35 
 
 
218 aa  78.6  0.00000000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2846  two component LuxR family transcriptional regulator  32.55 
 
 
209 aa  78.2  0.00000000000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  30.37 
 
 
216 aa  77.4  0.0000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  28.99 
 
 
205 aa  77.8  0.0000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.438194 
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  28.72 
 
 
209 aa  77.8  0.0000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  31.28 
 
 
215 aa  77.8  0.0000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  32.02 
 
 
224 aa  78.2  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  28.72 
 
 
209 aa  77.8  0.0000000000001  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  32 
 
 
220 aa  77.8  0.0000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  30.95 
 
 
209 aa  77.8  0.0000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  28.72 
 
 
209 aa  77.8  0.0000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  32.24 
 
 
215 aa  76.6  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  30 
 
 
223 aa  77.4  0.0000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  34.02 
 
 
212 aa  77  0.0000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  31.37 
 
 
209 aa  77.4  0.0000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  32.58 
 
 
214 aa  77  0.0000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  31.48 
 
 
213 aa  76.3  0.0000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  35.43 
 
 
215 aa  76.3  0.0000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  32.14 
 
 
206 aa  76.6  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  29.09 
 
 
235 aa  76.6  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  28.43 
 
 
220 aa  76.6  0.0000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  33.03 
 
 
221 aa  76.6  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  28.06 
 
 
208 aa  76.6  0.0000000000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  29.63 
 
 
218 aa  76.3  0.0000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  31.5 
 
 
213 aa  75.9  0.0000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  29.44 
 
 
211 aa  75.9  0.0000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007410  Ava_B0029  two component LuxR family transcriptional regulator  25.35 
 
 
220 aa  75.5  0.0000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.268532  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  31.07 
 
 
221 aa  75.9  0.0000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  30.19 
 
 
224 aa  75.9  0.0000000000005  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  30.7 
 
 
215 aa  75.5  0.0000000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  30.61 
 
 
213 aa  75.5  0.0000000000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  31.28 
 
 
221 aa  75.5  0.0000000000006  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4561  two component transcriptional regulator, LuxR family  27.52 
 
 
217 aa  75.5  0.0000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  30.2 
 
 
219 aa  75.5  0.0000000000006  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  30.2 
 
 
219 aa  75.5  0.0000000000006  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  30.5 
 
 
220 aa  75.5  0.0000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  30.2 
 
 
219 aa  75.5  0.0000000000006  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal 
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.25 
 
 
213 aa  75.1  0.0000000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0094  two component transcriptional regulator, LuxR family  28.51 
 
 
233 aa  75.1  0.0000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0277195 
 
 
-
 
NC_013037  Dfer_0722  two component transcriptional regulator, LuxR family  28.02 
 
 
206 aa  75.1  0.0000000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.511528  normal  0.608348 
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  27.27 
 
 
210 aa  74.7  0.0000000000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  28.77 
 
 
216 aa  74.7  0.0000000000009  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.71 
 
 
239 aa  74.3  0.000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.711047 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  31.42 
 
 
257 aa  74.7  0.000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  31.13 
 
 
218 aa  74.7  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  26.19 
 
 
213 aa  74.3  0.000000000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  33.64 
 
 
214 aa  74.3  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  27.84 
 
 
206 aa  73.9  0.000000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  28.43 
 
 
214 aa  73.9  0.000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  33.73 
 
 
218 aa  73.9  0.000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  33.33 
 
 
214 aa  73.9  0.000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  24.42 
 
 
208 aa  73.9  0.000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_41040  Two-component response regulator, LuxR family  34.02 
 
 
208 aa  72.8  0.000000000003  Azotobacter vinelandii DJ  Bacteria  normal  0.136918  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  32.44 
 
 
225 aa  73.6  0.000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  25 
 
 
208 aa  72.8  0.000000000003  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  27.78 
 
 
219 aa  72.8  0.000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  29.44 
 
 
216 aa  72.8  0.000000000004  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  32.56 
 
 
223 aa  72.8  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_008726  Mvan_1358  two component LuxR family transcriptional regulator  31.03 
 
 
220 aa  72.8  0.000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110964  normal 
 
 
-
 
NC_013174  Jden_1659  two component transcriptional regulator, LuxR family  29.03 
 
 
207 aa  72.8  0.000000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  0.319135  normal  0.0403017 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  29.44 
 
 
209 aa  72.8  0.000000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  26.69 
 
 
242 aa  72.4  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2354  two component LuxR family transcriptional regulator  29.95 
 
 
236 aa  72.4  0.000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.399998  normal 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  29.72 
 
 
204 aa  72.4  0.000000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0081  two component LuxR family transcriptional regulator  31.09 
 
 
196 aa  72.4  0.000000000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
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