| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2504 |
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| Symbol | |
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| ID | 5670900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2981555 |
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| End bp | 2982211 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641241421 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001506842 |
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| Protein GI | 158314334 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00866313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGTTG CGATCGCCGA GGACAGCGGA CTCATCCGGG AGGCGCTCAG CGTTCTGCTC
GCGACCATCG GGGTGGAGGT CACCGCCTCC GTGCCGACCG GGACGGAGCT GCTCGCCGTC
GTGCGGGACG CCCCGCCCGA CGTCGCGATC GTGGACATGC GGATGCCCCC GACCAGGACC
AACGAGGGGC TGCTGACGGC CCGCGCGCTG CGGCAGGCGC ACCCGGGGAT GGGCGTCCTG
GTGGTCACCG CGCACGACGA CGACCCGTTC GCCGCGGACC TGTTCGCCGG TGGCGCCGCC
GGCATCGGGT ACATGCGCAA GGACAACATC ACCAACCGGC AGGCGTTGAA GGACGCCCTC
GAGCGGCTCC GCGAGGGGCA GCCGGTCATC GACTCGCACA TCGCCGCGCG GCTGCTCGCC
GGCTACCCGC AGTCGCAGCG CCTGAGCGGG CTGTCGGAGC GCGAGCGCCG CATCCTCGAG
CTGATGGCCC AGGGCCTGTC GAACAGCGGG ATCGCCCAGC GGGTGCACCT GAGCCCGAAG
ACGGTCGAAT CCCACATCGC GAGCATCTTC ACCAAGCTGG GGCTGCGGCC GGAGCCAACC
GAGAACCGCC GGGTGCTCGC CGTCCTGGCC TGGGCGGACG CCGCCCGCCA CGGCTGA
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| Protein sequence | MRVAIAEDSG LIREALSVLL ATIGVEVTAS VPTGTELLAV VRDAPPDVAI VDMRMPPTRT
NEGLLTARAL RQAHPGMGVL VVTAHDDDPF AADLFAGGAA GIGYMRKDNI TNRQALKDAL
ERLREGQPVI DSHIAARLLA GYPQSQRLSG LSERERRILE LMAQGLSNSG IAQRVHLSPK
TVESHIASIF TKLGLRPEPT ENRRVLAVLA WADAARHG
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