More than 300 homologs were found in PanDaTox collection
for query gene Strop_2758 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_2758  response regulator receiver  100 
 
 
220 aa  434  1e-121  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  78.4 
 
 
226 aa  337  8e-92  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  71.5 
 
 
214 aa  306  2.0000000000000002e-82  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  71.36 
 
 
213 aa  304  8.000000000000001e-82  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  73.49 
 
 
221 aa  303  1.0000000000000001e-81  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  68.69 
 
 
215 aa  298  4e-80  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  68.22 
 
 
223 aa  296  2e-79  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  71.83 
 
 
212 aa  291  5e-78  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  65.89 
 
 
215 aa  278  5e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  68.69 
 
 
225 aa  273  1.0000000000000001e-72  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  62.15 
 
 
243 aa  269  2.9999999999999997e-71  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  61.21 
 
 
214 aa  260  1e-68  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  62.15 
 
 
215 aa  259  2e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  60.93 
 
 
215 aa  257  1e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  60.93 
 
 
214 aa  255  3e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  60.65 
 
 
215 aa  254  7e-67  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  58.69 
 
 
220 aa  248  4e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  55.87 
 
 
218 aa  245  3e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  59.35 
 
 
213 aa  242  3e-63  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  57.48 
 
 
218 aa  242  3.9999999999999997e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  57.94 
 
 
226 aa  241  6e-63  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  56.02 
 
 
217 aa  238  5e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  55.09 
 
 
217 aa  238  5.999999999999999e-62  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  57.94 
 
 
213 aa  236  2e-61  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  57.94 
 
 
209 aa  234  7e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  56.07 
 
 
213 aa  232  3e-60  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  57.75 
 
 
213 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  54.88 
 
 
218 aa  229  2e-59  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  56.07 
 
 
214 aa  229  3e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  55.61 
 
 
214 aa  228  7e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  55.3 
 
 
221 aa  227  1e-58  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  61.21 
 
 
214 aa  225  3e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  54.93 
 
 
215 aa  225  4e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  53.95 
 
 
215 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  58.6 
 
 
228 aa  223  1e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.8 
 
 
217 aa  223  3e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  57.41 
 
 
220 aa  221  6e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  56.13 
 
 
213 aa  221  8e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  55.61 
 
 
213 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  57.28 
 
 
216 aa  216  2e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  53.74 
 
 
210 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  52.34 
 
 
214 aa  216  2.9999999999999998e-55  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  52.34 
 
 
214 aa  216  2.9999999999999998e-55  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  55.35 
 
 
218 aa  214  8e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  57.94 
 
 
214 aa  214  9.999999999999999e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  54.5 
 
 
242 aa  213  1.9999999999999998e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  52.8 
 
 
214 aa  211  5.999999999999999e-54  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  52.11 
 
 
214 aa  210  1e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  54.21 
 
 
220 aa  209  2e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  54.25 
 
 
233 aa  209  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  51.66 
 
 
211 aa  209  3e-53  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  50.23 
 
 
218 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  52.31 
 
 
214 aa  209  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  56.54 
 
 
214 aa  208  4e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  53.85 
 
 
219 aa  207  8e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  47.44 
 
 
215 aa  207  1e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  49.77 
 
 
221 aa  206  2e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  52.13 
 
 
209 aa  204  1e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  50.68 
 
 
228 aa  203  1e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  49.32 
 
 
219 aa  203  2e-51  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.92 
 
 
218 aa  202  3e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.25 
 
 
211 aa  200  9.999999999999999e-51  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.3 
 
 
213 aa  199  1.9999999999999998e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  50.46 
 
 
216 aa  199  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  61.9 
 
 
223 aa  197  7e-50  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  53.21 
 
 
218 aa  197  9e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  50.69 
 
 
220 aa  197  1.0000000000000001e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  52.83 
 
 
222 aa  197  1.0000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  49.08 
 
 
219 aa  196  2.0000000000000003e-49  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  49.77 
 
 
215 aa  194  8.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  48.13 
 
 
216 aa  193  2e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.95 
 
 
239 aa  192  4e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  53.55 
 
 
212 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  54.38 
 
 
216 aa  187  9e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  47.44 
 
 
218 aa  186  3e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  45.07 
 
 
214 aa  184  6e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  49.31 
 
 
235 aa  185  6e-46  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  56.54 
 
 
215 aa  184  1.0000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  44.86 
 
 
217 aa  183  2.0000000000000003e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  53.85 
 
 
228 aa  182  4.0000000000000006e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  46.48 
 
 
214 aa  181  5.0000000000000004e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  49.07 
 
 
257 aa  181  8.000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  48.11 
 
 
224 aa  180  2e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  46.01 
 
 
815 aa  178  4.999999999999999e-44  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  47.51 
 
 
221 aa  176  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  46.95 
 
 
218 aa  174  9.999999999999999e-43  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  43.26 
 
 
229 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  42.13 
 
 
218 aa  167  8e-41  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  47.64 
 
 
208 aa  167  1e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  46.61 
 
 
226 aa  164  6.9999999999999995e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.7 
 
 
226 aa  164  8e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  46.98 
 
 
239 aa  155  3e-37  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  42.79 
 
 
228 aa  155  5.0000000000000005e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  41.74 
 
 
222 aa  150  1e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  37.56 
 
 
219 aa  118  7.999999999999999e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  37.8 
 
 
223 aa  118  7.999999999999999e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  35.71 
 
 
218 aa  115  5e-25  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  37.32 
 
 
222 aa  113  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.05 
 
 
224 aa  112  5e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  36.65 
 
 
218 aa  109  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
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