| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6494 |
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| Symbol | |
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| ID | 5674809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7895404 |
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| End bp | 7896111 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641245342 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001510737 |
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| Protein GI | 158318229 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0149487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.504125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTC GTGTAGTCCT CGCTGAGGAC AACGCCCTGC TTCGGCATGG TCTGGCAACG
CTGATCGAGC GTGCGGACGG CCTGGAGCTC GTCGGCACGG CGACCGATCA GCCGTCCCTG
GAACAGGCGG TGCGCGACCA CGATCCGGAC GTGGTGGTGA CCGACATCAG GATGCCGCCG
TCCCGTTCGG ACGAGGGCAT CAAGGTCGCC GGGTGGCTGC GGCGGGAGCG CCCGGCGGTC
GGCGTCGTCG TCCTCAGCCA GCACGCCGAG GCCACCTACG CCCTCGCGTT GCTCGAGGGC
GGCTCGTCCG GGCGGGCGTA CCTGCTCAAG GAGCGGGTGG CCGGCGTGGA CGACCTGCTG
CGGGCCATCC GCGCGGTCGC GGCCGGAGAG TCGGTGATCG ACCCGGCGGT GGTGGAGGGG
CTGGTCGCGG CGAACGCGCG CCGCCAGCAC ACCGAGCTGG ACCGGCTGAC CCCGCGCGAG
CGGGAGGTGC TGAGCCACAT GGCCCAGGGC TGGAGCAACG CGGCGATCGC CGGGACGCTG
GTCCTGTCCG AACGGGCGGT GGAGAAGCAC AGCAACTCGA TCTTCGCGAA GCTCGGCCTG
ACCGACGAGC CCGACCTGAA CCGGCGGGTG AAGGCCGTCC TGCTCTACCT GCACTCGGGG
CATCGCCCCG CAAGCGGGTC GACGGGGAAG GTAGCCACAC CGACCTGA
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| Protein sequence | MAVRVVLAED NALLRHGLAT LIERADGLEL VGTATDQPSL EQAVRDHDPD VVVTDIRMPP
SRSDEGIKVA GWLRRERPAV GVVVLSQHAE ATYALALLEG GSSGRAYLLK ERVAGVDDLL
RAIRAVAAGE SVIDPAVVEG LVAANARRQH TELDRLTPRE REVLSHMAQG WSNAAIAGTL
VLSERAVEKH SNSIFAKLGL TDEPDLNRRV KAVLLYLHSG HRPASGSTGK VATPT
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