Gene Tfu_0330 details

Gene Information

• Locus tag: Tfu_0330
• ID: 3579811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 371614
• End bp: 372273
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637684014
• Product: LuxR response regulator receiver
• Protein accession: YP_288391
• Protein GI: 72160734
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.673991
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCGTGA TCATCGCTGA GGACTCGGTA CTGCTGCGGG GCGGCATGGC CCGGCTTCTG 
GAAGACGCGG GTATCGAGAT CGTCGCCCAG GTCGGTGACG CCGACGCGCT CCTCGCCGCA 
GTGGCCCGCC ACGACGACGT GGACTTGTGC CTGGTGGACG TCCGCATGCC GCCAACCTAC 
TCGGAAGAAG GCATGCACGC CGCGATCCGG ATCCGCAAGG AGCATCCCGA TGTCGCGGTG 
CTGCTGCTCT CCCAGCACGT GGTCGGCACC TACGCCTCGC AACTGCTGGG CGGTAGCGCG 
TCCAAGGTCG GCTACCTGCT CAAAGACCGC GTGGCCGACA TCGACGAGTT CCTGCAGACC 
CTGCGCCGTA TCGCCGACGG CGGGACCGCC ATCGACCCGG AGGTGGTGGC GCAGTTGCTG 
AGCCGCAACA CCGACAACGT GCTGGACCGG TTGAGTCCAC GCGAAACCGA GGTGCTCGCC 
GCTATGGCCG AGGGCCTCAA CAACGCCGGG ATCGCGGCGC GGCTGTTCAT CACGGAACGC 
GCGGTAGAGA AGCACATCCG GTCCATTTTC ACCAAGCTCA ACCTGCTTCC CGACACCCAC 
GAGCACCGCA GGGTGCTGGC CGTCCTGCAA TACCTGCGGG CCAGCTCCCG CCAGCCGTGA 

 

Protein sequence

MRVIIAEDSV LLRGGMARLL EDAGIEIVAQ VGDADALLAA VARHDDVDLC LVDVRMPPTY 
SEEGMHAAIR IRKEHPDVAV LLLSQHVVGT YASQLLGGSA SKVGYLLKDR VADIDEFLQT 
LRRIADGGTA IDPEVVAQLL SRNTDNVLDR LSPRETEVLA AMAEGLNNAG IAARLFITER 
AVEKHIRSIF TKLNLLPDTH EHRRVLAVLQ YLRASSRQP