| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0340 |
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| Symbol | |
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| ID | 5675652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 408054 |
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| End bp | 408719 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239272 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001504712 |
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| Protein GI | 158312204 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0115466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGTGA CGCCGACCCG GGTCGTCCTG GCGGACGACG CGCCGCTGTT CCGTCAGGCC
ATAGCCTGGC TGCTGGAGCA GCACGACTTC CAGGTCGTGG GGCAGGTGAG CGACGCCGAC
GGGCTGCGTA ACGCGGTCTC GGCGCTACGC CCCGACATCG CGGTCATCGA CATCCGCATG
CCTCCCACCG GCCGGCTGGA AGGCCTGGAG AGCGCGGTGG AGCTGCGCGC CCGGCATCCG
GACCTCGGGG TGCTGCTGCT CTCGCACTAC CTGGAGTCGC ATTACCTTCC GGTGCTTTTC
GGCGCGAACG CCCGGGGCGT GGGCTATCTA CTCAAAGAGC GCGTGACCGG CATCGAGGCG
TTCGTCGAGG CCGTTACCCG GGTCGCGGCG GGAGGCTGCG TTCTCGACCC CGAGGTCGTC
GACCTGATGA TCGCCGCCCG GTCGCGGCGT GATCCCCTGC ACACCCTGAC CGCCCGCGAA
CGGGAGGTGC TCGCGCTGAT GGCCGAGGGC CGTTCCAACC AGGCGATCGG TGCGCAGCTG
GTCCTCACTC CGAAGACGGT CGAATCCCAT GTGCGCAGCA TTTTCACCCG GCTCGGCCTG
GCACCCGAAC CGGACGATCA CCGGCGGGTT CTCGCGGTGC TCACCTATCT GCGAGCACAT
CACTGA
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| Protein sequence | MRVTPTRVVL ADDAPLFRQA IAWLLEQHDF QVVGQVSDAD GLRNAVSALR PDIAVIDIRM
PPTGRLEGLE SAVELRARHP DLGVLLLSHY LESHYLPVLF GANARGVGYL LKERVTGIEA
FVEAVTRVAA GGCVLDPEVV DLMIAARSRR DPLHTLTARE REVLALMAEG RSNQAIGAQL
VLTPKTVESH VRSIFTRLGL APEPDDHRRV LAVLTYLRAH H
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