More than 300 homologs were found in PanDaTox collection
for query gene Franean1_0340 on replicon NC_009921
Organism: Frankia sp. EAN1pec



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  100 
 
 
221 aa  438  9.999999999999999e-123  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  54.93 
 
 
218 aa  236  3e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  59.81 
 
 
257 aa  223  2e-57  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  55.4 
 
 
217 aa  223  2e-57  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  52.61 
 
 
220 aa  217  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  51.4 
 
 
218 aa  213  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  52.83 
 
 
215 aa  210  1e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  53.21 
 
 
218 aa  209  2e-53  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  54.88 
 
 
215 aa  206  2e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  49.54 
 
 
218 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  49.77 
 
 
220 aa  206  2e-52  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  54.25 
 
 
213 aa  206  3e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  204  1e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  50.23 
 
 
214 aa  203  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  52.73 
 
 
219 aa  203  2e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  51.66 
 
 
226 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  50.71 
 
 
215 aa  202  3e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  53.77 
 
 
213 aa  202  4e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  51.18 
 
 
226 aa  199  1.9999999999999998e-50  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  50.94 
 
 
214 aa  200  1.9999999999999998e-50  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  50.23 
 
 
214 aa  199  3.9999999999999996e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  51.2 
 
 
242 aa  199  3.9999999999999996e-50  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  50 
 
 
221 aa  197  9e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  48.13 
 
 
215 aa  196  2.0000000000000003e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  49.3 
 
 
214 aa  196  2.0000000000000003e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  50.23 
 
 
215 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  54.72 
 
 
209 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  49.77 
 
 
214 aa  195  5.000000000000001e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  51.18 
 
 
214 aa  195  6e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  53.52 
 
 
225 aa  194  1e-48  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  48.6 
 
 
215 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  52.13 
 
 
213 aa  192  3e-48  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  48.58 
 
 
213 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  48.58 
 
 
215 aa  192  5e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  53.3 
 
 
218 aa  190  1e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  48.34 
 
 
217 aa  189  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  48.83 
 
 
218 aa  189  2e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  49.06 
 
 
215 aa  189  2.9999999999999997e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  49.53 
 
 
224 aa  189  2.9999999999999997e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  50.7 
 
 
221 aa  188  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  50.22 
 
 
221 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  48.36 
 
 
223 aa  186  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  48.8 
 
 
209 aa  186  2e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  50.47 
 
 
220 aa  186  2e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  50.93 
 
 
222 aa  186  2e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  48.34 
 
 
212 aa  186  2e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  49.53 
 
 
216 aa  186  3e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  46.01 
 
 
214 aa  186  3e-46  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  46.01 
 
 
214 aa  186  3e-46  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.51 
 
 
217 aa  185  6e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  48.36 
 
 
213 aa  184  8e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.93 
 
 
218 aa  184  8e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  48.11 
 
 
217 aa  184  9e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  47.39 
 
 
210 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  45.5 
 
 
211 aa  181  5.0000000000000004e-45  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  46.26 
 
 
216 aa  181  1e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  46.23 
 
 
215 aa  180  1e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  46.01 
 
 
243 aa  179  2.9999999999999997e-44  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  47.87 
 
 
214 aa  178  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  51.17 
 
 
239 aa  179  4e-44  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  47.87 
 
 
212 aa  177  9e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  48.37 
 
 
214 aa  177  1e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  46.23 
 
 
213 aa  177  1e-43  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  50.7 
 
 
214 aa  176  3e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  47.66 
 
 
219 aa  175  4e-43  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  47.25 
 
 
235 aa  175  4e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.29 
 
 
239 aa  175  5e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.5 
 
 
213 aa  173  1.9999999999999998e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  46.4 
 
 
220 aa  171  9e-42  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  46.92 
 
 
214 aa  169  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  56.89 
 
 
223 aa  170  2e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  44.13 
 
 
229 aa  169  3e-41  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  47.42 
 
 
218 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  47.89 
 
 
233 aa  169  4e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  45.79 
 
 
219 aa  168  5e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  47.22 
 
 
220 aa  168  6e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  45.5 
 
 
228 aa  168  6e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  44.55 
 
 
214 aa  168  7e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  50 
 
 
216 aa  167  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  51.76 
 
 
213 aa  166  2.9999999999999998e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  44.13 
 
 
815 aa  164  1.0000000000000001e-39  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  47.87 
 
 
214 aa  163  2.0000000000000002e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  46.05 
 
 
228 aa  162  3e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  49.55 
 
 
228 aa  161  6e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  51.79 
 
 
214 aa  161  6e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  44.8 
 
 
228 aa  159  3e-38  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  44.39 
 
 
222 aa  158  5e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  40.95 
 
 
218 aa  157  1e-37  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  48.58 
 
 
215 aa  154  1e-36  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  45.5 
 
 
208 aa  149  2e-35  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.86 
 
 
226 aa  147  1.0000000000000001e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  43.5 
 
 
226 aa  147  1.0000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.98 
 
 
211 aa  146  2.0000000000000003e-34  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  45.75 
 
 
216 aa  133  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  37.91 
 
 
224 aa  122  6e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  39.32 
 
 
223 aa  119  3e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  36.95 
 
 
221 aa  117  1.9999999999999998e-25  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  35 
 
 
224 aa  115  6e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  38.35 
 
 
222 aa  114  1.0000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  36.41 
 
 
222 aa  113  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>