Gene Ndas_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2092 
Symbol 
ID9245942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2513854 
End bp2514504 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003680024 
Protein GI297561050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCATCG CCGAGGACTC GGTGCTGCTG CGCAGCGGGA TGGCCCGCCT GCTGGAGGAC 
GCGGGGGTGG AGATCGTCGC ACAGGTCGGC GACGCCGACG CGCTGATGCG GGCGGTGGAG
GAGCACCCCG ACGTGGACCT GTGCCTGGTC GACATCCGCA TGCCGCCCAC CTACTCCGAG
GAGGGCATCC AGGCGGGTAT CGCCATCCGC CAGAAGTACC CGGAGGTGGC GGTGCTGCTG
CTGTCCCAGC ACGTGGTCAG CCGCTACGCC GCCGACCTGC TCGGCAGCGG GGCCAGCAGG
GTCGGCTACC TGCTCAAGGA CCGGGTCGCC GACATCGACG AGTTCCTGTC GGTGCTGCGC
CGCGTCGCCG GGGGCGGCGC CGCCATCGAC CCGGAGGTGG TCTCGCAGCT GCTCAGCCGA
CGGCGCGACA ACGCCCTGGC CCGGCTCACC CCGCGCGAGA CCGAGGTGCT GGAGCTCATG
GCGCAGGGGC TGAACAACGC GGGCGTGGCC TCGCGGCTGA CCGTCACCGA ACGCGCCGTG
GAGAAGCACA TCCGATCGAT CTTCACCAAG CTGGACCTGG GCCACGACGA CCACGACCAC
CGCAGGGTGC AGGCCGTGCT GCGCTACCTG CGCGGCGCGG ACCGGGACTG A
 
Protein sequence
MVIAEDSVLL RSGMARLLED AGVEIVAQVG DADALMRAVE EHPDVDLCLV DIRMPPTYSE 
EGIQAGIAIR QKYPEVAVLL LSQHVVSRYA ADLLGSGASR VGYLLKDRVA DIDEFLSVLR
RVAGGGAAID PEVVSQLLSR RRDNALARLT PRETEVLELM AQGLNNAGVA SRLTVTERAV
EKHIRSIFTK LDLGHDDHDH RRVQAVLRYL RGADRD