More than 300 homologs were found in PanDaTox collection
for query gene Ndas_1960 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  427  1e-119  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  71.83 
 
 
212 aa  304  6e-82  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  71.36 
 
 
243 aa  303  9.000000000000001e-82  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  71.36 
 
 
223 aa  302  3.0000000000000004e-81  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  68.69 
 
 
220 aa  298  4e-80  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  70.7 
 
 
215 aa  295  4e-79  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  70.89 
 
 
213 aa  292  2e-78  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  68.54 
 
 
214 aa  290  8e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  67.61 
 
 
226 aa  288  4e-77  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  70.09 
 
 
225 aa  286  1e-76  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  71.23 
 
 
221 aa  286  2e-76  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  66.67 
 
 
215 aa  280  1e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  64.95 
 
 
214 aa  275  3e-73  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  62.91 
 
 
215 aa  266  2e-70  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  63.08 
 
 
226 aa  259  2e-68  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  61.5 
 
 
220 aa  258  5.0000000000000005e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  58.69 
 
 
218 aa  250  9.000000000000001e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  59.53 
 
 
218 aa  250  1e-65  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  57.75 
 
 
217 aa  245  3e-64  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  59.15 
 
 
213 aa  245  3e-64  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  58.69 
 
 
214 aa  243  1.9999999999999999e-63  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  56.54 
 
 
217 aa  240  1e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  59.15 
 
 
213 aa  238  5.999999999999999e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  58.41 
 
 
209 aa  238  6.999999999999999e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  58.41 
 
 
215 aa  237  9e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  59.53 
 
 
213 aa  235  3e-61  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  56.94 
 
 
221 aa  235  5.0000000000000005e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  59.15 
 
 
213 aa  234  9e-61  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  61.97 
 
 
213 aa  230  1e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  55.4 
 
 
215 aa  226  2e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  57.08 
 
 
213 aa  226  2e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  54.46 
 
 
214 aa  225  4e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  61.03 
 
 
214 aa  224  5.0000000000000005e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  54.93 
 
 
214 aa  225  5.0000000000000005e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  57.75 
 
 
214 aa  224  1e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  54.72 
 
 
214 aa  223  2e-57  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  54.72 
 
 
214 aa  223  2e-57  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  57.14 
 
 
242 aa  223  2e-57  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  60.28 
 
 
220 aa  222  4e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.56 
 
 
217 aa  221  6e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  55 
 
 
219 aa  220  9.999999999999999e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  53.74 
 
 
215 aa  220  9.999999999999999e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  58.41 
 
 
218 aa  219  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  55.66 
 
 
214 aa  218  6e-56  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  54.07 
 
 
211 aa  216  2e-55  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  54.93 
 
 
218 aa  216  2e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  51.64 
 
 
218 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  53.3 
 
 
214 aa  214  5.9999999999999996e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  57.48 
 
 
228 aa  213  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  55.87 
 
 
216 aa  213  9.999999999999999e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.07 
 
 
218 aa  213  2.9999999999999995e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  50.23 
 
 
214 aa  212  3.9999999999999995e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  53.05 
 
 
219 aa  209  2e-53  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  53.52 
 
 
233 aa  209  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  52.61 
 
 
209 aa  209  4e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  54.98 
 
 
222 aa  208  5e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  52.11 
 
 
215 aa  207  7e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  49.77 
 
 
215 aa  206  2e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  52.8 
 
 
216 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  55.81 
 
 
214 aa  206  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  55.35 
 
 
220 aa  205  4e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  50.23 
 
 
218 aa  205  5e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  48.83 
 
 
216 aa  202  2e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  58.99 
 
 
223 aa  202  3e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  49.53 
 
 
210 aa  202  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  55.4 
 
 
218 aa  200  1.9999999999999998e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  51.4 
 
 
214 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  56.6 
 
 
212 aa  197  1.0000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  50.46 
 
 
219 aa  197  1.0000000000000001e-49  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  48.13 
 
 
221 aa  196  1.0000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  48.11 
 
 
229 aa  196  2.0000000000000003e-49  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.89 
 
 
211 aa  193  1e-48  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  55.2 
 
 
228 aa  193  2e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.12 
 
 
239 aa  192  3e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  55.56 
 
 
216 aa  192  3e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  48.39 
 
 
220 aa  192  3e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  47.17 
 
 
214 aa  191  6e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  191  9e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.95 
 
 
213 aa  186  2e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  47.25 
 
 
228 aa  186  3e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  48.13 
 
 
257 aa  181  8.000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  44.19 
 
 
217 aa  179  2e-44  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  52.85 
 
 
215 aa  179  2.9999999999999997e-44  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  46.76 
 
 
235 aa  179  4e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  49.3 
 
 
218 aa  178  5.999999999999999e-44  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  50.47 
 
 
239 aa  173  1.9999999999999998e-42  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  47.49 
 
 
221 aa  172  5e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  43.66 
 
 
815 aa  164  9e-40  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  46.98 
 
 
208 aa  163  2.0000000000000002e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  43.06 
 
 
228 aa  162  4.0000000000000004e-39  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.86 
 
 
226 aa  159  3e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  42.18 
 
 
218 aa  158  6e-38  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  44.8 
 
 
226 aa  157  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  42.52 
 
 
222 aa  150  1e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  35.09 
 
 
224 aa  112  6e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_5808  two component LuxR family transcriptional regulator  49.12 
 
 
146 aa  110  2.0000000000000002e-23  Frankia sp. EAN1pec  Bacteria  normal  0.812897  normal 
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  32.57 
 
 
209 aa  108  7.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  32.57 
 
 
209 aa  108  7.000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  32.57 
 
 
209 aa  108  7.000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  32.57 
 
 
209 aa  108  7.000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>