More than 300 homologs were found in PanDaTox collection
for query gene Xcel_0244 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  100 
 
 
216 aa  413  1e-114  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  65.12 
 
 
224 aa  267  1e-70  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  58.49 
 
 
217 aa  235  4e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  53.05 
 
 
218 aa  223  2e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  53.3 
 
 
218 aa  221  6e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  54.5 
 
 
214 aa  218  7.999999999999999e-56  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  52.83 
 
 
220 aa  216  1e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  54.46 
 
 
213 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  52.83 
 
 
217 aa  213  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  54.71 
 
 
219 aa  213  1.9999999999999998e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  53.95 
 
 
215 aa  212  2.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  53.3 
 
 
213 aa  207  7e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  50.7 
 
 
215 aa  207  8e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  51.17 
 
 
218 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.15 
 
 
218 aa  204  7e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  54.93 
 
 
213 aa  204  7e-52  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  50.47 
 
 
213 aa  204  9e-52  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  50.94 
 
 
215 aa  204  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  53.55 
 
 
233 aa  204  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  48.83 
 
 
215 aa  202  2e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  50.7 
 
 
226 aa  203  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  51.17 
 
 
214 aa  202  3e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.06 
 
 
217 aa  202  4e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  49.3 
 
 
214 aa  202  4e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  52.09 
 
 
229 aa  201  5e-51  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  50 
 
 
214 aa  202  5e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  48.58 
 
 
214 aa  201  6e-51  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  48.58 
 
 
214 aa  201  6e-51  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  55.4 
 
 
209 aa  200  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  49.53 
 
 
216 aa  200  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  53.05 
 
 
213 aa  198  5e-50  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  49.77 
 
 
214 aa  198  6e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  50.94 
 
 
214 aa  198  6e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  49.3 
 
 
212 aa  196  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  49.53 
 
 
218 aa  196  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  48.83 
 
 
226 aa  196  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  48.33 
 
 
211 aa  196  3e-49  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  50 
 
 
217 aa  195  4.0000000000000005e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  53.59 
 
 
242 aa  195  5.000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  50.93 
 
 
219 aa  194  9e-49  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  50.23 
 
 
215 aa  193  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  51.16 
 
 
218 aa  193  1e-48  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  50.94 
 
 
214 aa  193  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  48.13 
 
 
220 aa  193  2e-48  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  49.28 
 
 
209 aa  191  7e-48  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  49.3 
 
 
235 aa  191  9e-48  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  50.47 
 
 
210 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  54.21 
 
 
220 aa  189  2e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  50.23 
 
 
218 aa  190  2e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  51.4 
 
 
214 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  53.52 
 
 
239 aa  188  7e-47  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  47.42 
 
 
215 aa  187  8e-47  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  47.64 
 
 
223 aa  187  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.23 
 
 
213 aa  186  2e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  49.53 
 
 
221 aa  186  3e-46  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  47.64 
 
 
215 aa  183  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  49.53 
 
 
221 aa  183  2.0000000000000003e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  48.58 
 
 
214 aa  182  4.0000000000000006e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  47.44 
 
 
221 aa  182  4.0000000000000006e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  50.47 
 
 
214 aa  181  5.0000000000000004e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  52.38 
 
 
212 aa  181  6e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  49.06 
 
 
228 aa  181  7e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  48.58 
 
 
213 aa  180  1e-44  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  48.83 
 
 
215 aa  180  1e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  52.11 
 
 
222 aa  180  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  53.92 
 
 
228 aa  180  1e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  46.51 
 
 
219 aa  179  2e-44  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  45.58 
 
 
243 aa  179  4e-44  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  49.3 
 
 
215 aa  176  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  48.62 
 
 
221 aa  175  4e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.95 
 
 
239 aa  175  6e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  48.11 
 
 
213 aa  175  6e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  49.77 
 
 
257 aa  174  9.999999999999999e-43  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  48.11 
 
 
218 aa  172  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  50 
 
 
218 aa  173  1.9999999999999998e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  54.44 
 
 
214 aa  172  2.9999999999999996e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  47.47 
 
 
220 aa  172  2.9999999999999996e-42  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  51.17 
 
 
214 aa  172  3.9999999999999995e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  53.16 
 
 
215 aa  172  5e-42  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  47.03 
 
 
228 aa  170  1e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  46.7 
 
 
214 aa  170  2e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  44.34 
 
 
815 aa  169  3e-41  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  52.31 
 
 
223 aa  167  1e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.93 
 
 
211 aa  166  2.9999999999999998e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  43.6 
 
 
218 aa  166  2.9999999999999998e-40  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  50.23 
 
 
216 aa  166  4e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  49.53 
 
 
225 aa  163  2.0000000000000002e-39  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  48.84 
 
 
216 aa  163  2.0000000000000002e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  44.86 
 
 
222 aa  155  6e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  42.33 
 
 
228 aa  152  2.9999999999999998e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  43.46 
 
 
220 aa  152  2.9999999999999998e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.32 
 
 
226 aa  143  2e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  43.18 
 
 
226 aa  140  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  43.4 
 
 
208 aa  139  3.9999999999999997e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.71 
 
 
216 aa  124  1e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.07 
 
 
213 aa  120  1.9999999999999998e-26  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  37.73 
 
 
213 aa  119  3e-26  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  41.92 
 
 
212 aa  118  6e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  36.65 
 
 
225 aa  117  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  39.09 
 
 
227 aa  115  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>