More than 300 homologs were found in PanDaTox collection
for query gene Tmel_1038 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009616  Tmel_1038  Holliday junction resolvase  100 
 
 
157 aa  326  9e-89  Thermosipho melanesiensis BI429  Bacteria  normal  0.0318292  n/a   
 
 
-
 
NC_009718  Fnod_1720  crossover junction endodeoxyribonuclease RuvC  60.13 
 
 
166 aa  180  6e-45  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.029168  n/a   
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  54.67 
 
 
165 aa  176  1e-43  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  52.23 
 
 
164 aa  174  3e-43  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  51.32 
 
 
162 aa  171  3.9999999999999995e-42  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0343  Holliday junction resolvase  58.97 
 
 
165 aa  171  3.9999999999999995e-42  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0361  Holliday junction resolvase  58.97 
 
 
165 aa  171  3.9999999999999995e-42  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  51.33 
 
 
161 aa  170  7.999999999999999e-42  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  51.33 
 
 
166 aa  166  1e-40  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  51.33 
 
 
182 aa  166  1e-40  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  50.66 
 
 
165 aa  166  1e-40  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  49.03 
 
 
179 aa  164  2.9999999999999998e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  50.66 
 
 
163 aa  162  2.0000000000000002e-39  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  53.02 
 
 
164 aa  161  3e-39  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  48.03 
 
 
164 aa  156  1e-37  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  48.03 
 
 
159 aa  152  2e-36  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  46.71 
 
 
164 aa  152  2e-36  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  47.37 
 
 
171 aa  151  2.9999999999999998e-36  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_010003  Pmob_1484  Holliday junction resolvase  56.67 
 
 
163 aa  150  5.9999999999999996e-36  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  47.37 
 
 
167 aa  149  2e-35  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_009523  RoseRS_4363  Holliday junction resolvase  51.68 
 
 
168 aa  145  2.0000000000000003e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.140829 
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  45.39 
 
 
161 aa  144  4.0000000000000006e-34  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_013739  Cwoe_3179  crossover junction endodeoxyribonuclease RuvC  44.67 
 
 
164 aa  144  4.0000000000000006e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal 
 
 
-
 
NC_008554  Sfum_0995  crossover junction endodeoxyribonuclease RuvC  44.67 
 
 
183 aa  144  5e-34  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.410626  normal 
 
 
-
 
NC_009972  Haur_4753  Holliday junction resolvase  49.34 
 
 
165 aa  142  1e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0111  Holliday junction resolvase  45.33 
 
 
156 aa  142  2e-33  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_008346  Swol_1433  hypothetical protein  50 
 
 
172 aa  142  2e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.000000864662  n/a   
 
 
-
 
NC_009767  Rcas_0719  Holliday junction resolvase  50.34 
 
 
168 aa  142  2e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_0984  crossover junction endodeoxyribonuclease RuvC  47.83 
 
 
200 aa  139  9.999999999999999e-33  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007796  Mhun_0890  Holliday junction resolvase  47.65 
 
 
164 aa  139  9.999999999999999e-33  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0795494 
 
 
-
 
NC_013205  Aaci_2115  crossover junction endodeoxyribonuclease RuvC  44.37 
 
 
184 aa  140  9.999999999999999e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.805464  n/a   
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  43.33 
 
 
160 aa  139  1.9999999999999998e-32  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_011661  Dtur_1614  Holliday junction resolvase  44.74 
 
 
158 aa  137  3.9999999999999997e-32  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  41.33 
 
 
176 aa  137  4.999999999999999e-32  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  40.79 
 
 
164 aa  135  2e-31  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  40.79 
 
 
164 aa  135  2e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  40.67 
 
 
180 aa  135  3.0000000000000003e-31  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_010424  Daud_1364  crossover junction endodeoxyribonuclease RuvC  46.62 
 
 
162 aa  134  5e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.553646  n/a   
 
 
-
 
NC_007973  Rmet_0426  Holliday junction resolvase  42.11 
 
 
181 aa  133  8e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.633574  normal  0.046933 
 
 
-
 
NC_011831  Cagg_2595  Holliday junction resolvase  46.05 
 
 
164 aa  133  9e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00143043 
 
 
-
 
NC_013517  Sterm_1604  crossover junction endodeoxyribonuclease RuvC  48.57 
 
 
192 aa  132  1.9999999999999998e-30  Sebaldella termitidis ATCC 33386  Bacteria  decreased coverage  0.0000000814107  n/a   
 
 
-
 
NC_007347  Reut_A0486  Holliday junction resolvase  42.11 
 
 
181 aa  130  6.999999999999999e-30  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0924  crossover junction endodeoxyribonuclease RuvC  45.52 
 
 
165 aa  130  9e-30  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.250191  n/a   
 
 
-
 
NC_013730  Slin_2240  crossover junction endodeoxyribonuclease RuvC  42.57 
 
 
182 aa  129  1.0000000000000001e-29  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0400  crossover junction endodeoxyribonuclease RuvC  41.22 
 
 
187 aa  129  1.0000000000000001e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.253093 
 
 
-
 
NC_003295  RSc0503  Holliday junction resolvase  40.13 
 
 
181 aa  129  2.0000000000000002e-29  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.46163 
 
 
-
 
NC_013552  DhcVS_385  crossover junction endodeoxyribonuclease  42.67 
 
 
165 aa  127  5.0000000000000004e-29  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0420  crossover junction endodeoxyribonuclease RuvC  41.33 
 
 
167 aa  127  5.0000000000000004e-29  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0443  crossover junction endodeoxyribonuclease RuvC  42.67 
 
 
165 aa  127  6e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2115  crossover junction endodeoxyribonuclease RuvC  39.6 
 
 
175 aa  127  6e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0681536  normal  0.335061 
 
 
-
 
NC_007947  Mfla_2354  Holliday junction resolvase  41.67 
 
 
180 aa  127  7.000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.542113 
 
 
-
 
NC_008817  P9515_11451  Holliday junction resolvase  43.92 
 
 
157 aa  126  1.0000000000000001e-28  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.447359  n/a   
 
 
-
 
NC_013525  Tter_0957  crossover junction endodeoxyribonuclease RuvC  44.67 
 
 
171 aa  126  1.0000000000000001e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_0379  Holliday junction resolvase  39.47 
 
 
181 aa  126  1.0000000000000001e-28  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1243  crossover junction endodeoxyribonuclease RuvC  39.86 
 
 
202 aa  126  1.0000000000000001e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0972  crossover junction endodeoxyribonuclease RuvC  39.13 
 
 
192 aa  125  2.0000000000000002e-28  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.00108753 
 
 
-
 
NC_012856  Rpic12D_0394  Holliday junction resolvase  39.47 
 
 
181 aa  125  2.0000000000000002e-28  Ralstonia pickettii 12D  Bacteria  normal  normal  0.638558 
 
 
-
 
NC_010681  Bphyt_3343  Holliday junction resolvase  41.18 
 
 
180 aa  125  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00888007 
 
 
-
 
NC_007951  Bxe_A0617  Holliday junction resolvase  41.18 
 
 
180 aa  124  4.0000000000000003e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.481352 
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  42.38 
 
 
173 aa  122  3e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010622  Bphy_2554  Holliday junction resolvase  40.52 
 
 
180 aa  122  3e-27  Burkholderia phymatum STM815  Bacteria  normal  0.250708  normal 
 
 
-
 
NC_008060  Bcen_0207  Holliday junction resolvase  39.47 
 
 
180 aa  121  3e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0690  Holliday junction resolvase  39.47 
 
 
180 aa  121  3e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1864  crossover junction endodeoxyribonuclease RuvC  41.3 
 
 
178 aa  121  4e-27  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.000897484  n/a   
 
 
-
 
NC_010814  Glov_1247  Holliday junction resolvase  42.96 
 
 
178 aa  121  4e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0583  Holliday junction resolvase  39.47 
 
 
183 aa  121  4e-27  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  41.72 
 
 
173 aa  121  4e-27  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  40.67 
 
 
173 aa  121  4e-27  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_007651  BTH_I1249  Holliday junction resolvase  39.47 
 
 
180 aa  121  5e-27  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0609  Holliday junction resolvase  39.47 
 
 
183 aa  120  5e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.385188  normal  0.439523 
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  41.72 
 
 
173 aa  121  5e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_014150  Bmur_1651  crossover junction endodeoxyribonuclease RuvC  41.03 
 
 
157 aa  120  6e-27  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3856  Holliday junction resolvase  39.74 
 
 
183 aa  120  6e-27  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  40.54 
 
 
173 aa  120  7e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_013124  Afer_1217  crossover junction endodeoxyribonuclease RuvC  38.22 
 
 
164 aa  120  8e-27  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.331391  n/a   
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  41.72 
 
 
173 aa  119  9.999999999999999e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_010508  Bcenmc03_0657  Holliday junction resolvase  38.82 
 
 
180 aa  119  9.999999999999999e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0658  crossover junction endodeoxyribonuclease RuvC  35.33 
 
 
191 aa  119  9.999999999999999e-27  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.545827  n/a   
 
 
-
 
NC_008312  Tery_3620  Holliday junction resolvase  42.76 
 
 
163 aa  119  9.999999999999999e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.139736 
 
 
-
 
NC_006348  BMA2355  Holliday junction resolvase  39.47 
 
 
180 aa  119  1.9999999999999998e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2534  Holliday junction resolvase  39.47 
 
 
180 aa  119  1.9999999999999998e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3405  Holliday junction resolvase  39.47 
 
 
180 aa  119  1.9999999999999998e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3364  Holliday junction resolvase  39.47 
 
 
180 aa  119  1.9999999999999998e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0671  Holliday junction resolvase  40.65 
 
 
194 aa  119  1.9999999999999998e-26  Psychrobacter cryohalolentis K5  Bacteria  normal  0.674635  normal 
 
 
-
 
NC_010084  Bmul_2694  Holliday junction resolvase  39.47 
 
 
180 aa  119  1.9999999999999998e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.218252  normal  0.976349 
 
 
-
 
NC_009076  BURPS1106A_3399  Holliday junction resolvase  39.47 
 
 
180 aa  119  1.9999999999999998e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3776  Holliday junction resolvase  38.16 
 
 
180 aa  118  3e-26  Burkholderia sp. 383  Bacteria  normal  0.518042  normal 
 
 
-
 
NC_007520  Tcr_0892  crossover junction endodeoxyribonuclease RuvC  41.91 
 
 
172 aa  118  3e-26  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00082317  n/a   
 
 
-
 
NC_008009  Acid345_3618  crossover junction endodeoxyribonuclease RuvC  37.09 
 
 
166 aa  118  3e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.1831  normal  0.457471 
 
 
-
 
NC_008785  BMASAVP1_A0268  Holliday junction resolvase  39.47 
 
 
284 aa  118  3e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1130  Holliday junction resolvase  39.47 
 
 
275 aa  118  3e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0699  Holliday junction resolvase  40.65 
 
 
194 aa  118  3.9999999999999996e-26  Psychrobacter arcticus 273-4  Bacteria  normal  0.207762  normal 
 
 
-
 
NC_008255  CHU_2183  Holliday junction resolvase  37.84 
 
 
200 aa  118  3.9999999999999996e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.198911 
 
 
-
 
NC_013203  Apar_0895  crossover junction endodeoxyribonuclease RuvC  42.76 
 
 
167 aa  117  4.9999999999999996e-26  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000302066  normal  0.153116 
 
 
-
 
NC_009049  Rsph17029_2208  Holliday junction resolvase  36.84 
 
 
168 aa  117  6e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.147946  normal  0.881162 
 
 
-
 
NC_007514  Cag_0164  crossover junction endodeoxyribonuclease RuvC  36 
 
 
192 aa  117  7e-26  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0079  Holliday junction resolvase  39.19 
 
 
181 aa  117  7.999999999999999e-26  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3065  Holliday junction resolvase  36.49 
 
 
169 aa  116  9.999999999999999e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  0.31187  normal  0.469914 
 
 
-
 
NC_007577  PMT9312_1065  Holliday junction resolvase  40.13 
 
 
157 aa  116  9.999999999999999e-26  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2141  Holliday junction resolvase  36.23 
 
 
165 aa  116  9.999999999999999e-26  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
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