Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0895 |
Symbol | |
ID | 8413761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1000092 |
End bp | 1000595 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645022478 |
Product | crossover junction endodeoxyribonuclease RuvC |
Protein accession | YP_003179915 |
Protein GI | 257784698 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000302066 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.153116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAATTC TTGGAATAGA CCCTGGTCTT GCTCACACTG GATGGGGAAT TGTAGAGACA AGGGGTTCTG AATGCCGTGC ACGTGCCTAT GGATGCATTA CTACAACTGC AGATGAGCCA ATAGATATGC GCTTGGGAAG AATTTATAAC CAAATCATTG ATGTTATAGA TAAGTTTTCG CCCGAGGCTC TTTCTATTGA GAGCATTTAC TTTGGACAGA ACGTTAAATC AGCTATTCCT ACTGCACATG CTCGTGGGGC TGCTATTGTT GCTTGTTCTA AAGCAGGTCT AACGGTTGGA GAATATACTC CAATGCAGAT AAAACAAGCA GTTGTTGGCA CAGGAGCTGC TGATAAACAA CAGGTTATGT ATATGGTCCA AAATATATTG TGCTTGGACC ATCAACCTCA TCCAGACCAT GCAGCAGATG CTTTAGCCGC TGCGGTCTGT CACGCTAATC TTGTAAGAAC TACCTCGCTT GGAAAGGGAA GAATACAACT ATGA
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Protein sequence | MVILGIDPGL AHTGWGIVET RGSECRARAY GCITTTADEP IDMRLGRIYN QIIDVIDKFS PEALSIESIY FGQNVKSAIP TAHARGAAIV ACSKAGLTVG EYTPMQIKQA VVGTGAADKQ QVMYMVQNIL CLDHQPHPDH AADALAAAVC HANLVRTTSL GKGRIQL
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