More than 300 homologs were found in PanDaTox collection
for query gene Apar_0895 on replicon NC_013203
Organism: Atopobium parvulum DSM 20469



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013203  Apar_0895  crossover junction endodeoxyribonuclease RuvC  100 
 
 
167 aa  345  2e-94  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000302066  normal  0.153116 
 
 
-
 
NC_013170  Ccur_12860  crossover junction endodeoxyribonuclease RuvC  59.33 
 
 
174 aa  171  3.9999999999999995e-42  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_07030  crossover junction endodeoxyribonuclease RuvC  56.38 
 
 
165 aa  167  8e-41  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000194314  normal  0.296999 
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  43.37 
 
 
163 aa  165  2.9999999999999998e-40  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_013204  Elen_0972  crossover junction endodeoxyribonuclease RuvC  55.35 
 
 
192 aa  164  5.9999999999999996e-40  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.00108753 
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  46.88 
 
 
166 aa  162  3e-39  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  45.34 
 
 
162 aa  159  2e-38  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  48.05 
 
 
167 aa  155  3e-37  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  45.22 
 
 
165 aa  149  2e-35  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  46.1 
 
 
159 aa  147  5e-35  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  42.31 
 
 
161 aa  147  8e-35  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  45.7 
 
 
182 aa  146  1.0000000000000001e-34  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  44.58 
 
 
179 aa  147  1.0000000000000001e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  45.03 
 
 
180 aa  144  6e-34  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_009972  Haur_4753  Holliday junction resolvase  49.34 
 
 
165 aa  144  7.0000000000000006e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  42.67 
 
 
164 aa  142  3e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  41.29 
 
 
160 aa  142  3e-33  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_013739  Cwoe_3179  crossover junction endodeoxyribonuclease RuvC  45.1 
 
 
164 aa  141  5e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal 
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  41.45 
 
 
164 aa  140  7e-33  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  44.52 
 
 
165 aa  140  9.999999999999999e-33  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_008346  Swol_1433  hypothetical protein  44.38 
 
 
172 aa  138  3.9999999999999997e-32  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.000000864662  n/a   
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  48.08 
 
 
173 aa  138  3.9999999999999997e-32  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_008463  PA14_51800  Holliday junction resolvase  49.34 
 
 
174 aa  137  6e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000486306 
 
 
-
 
NC_009656  PSPA7_4543  Holliday junction resolvase  48.68 
 
 
174 aa  136  1e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1270  Holliday junction resolvase  48.68 
 
 
174 aa  135  2e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.460583  normal  0.748169 
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  45.12 
 
 
173 aa  135  2e-31  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  45.03 
 
 
173 aa  135  3.0000000000000003e-31  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  47.71 
 
 
171 aa  135  3.0000000000000003e-31  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  47.06 
 
 
164 aa  134  5e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  44.44 
 
 
173 aa  134  6.0000000000000005e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009712  Mboo_0111  Holliday junction resolvase  40.38 
 
 
156 aa  134  8e-31  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  42.94 
 
 
164 aa  133  9e-31  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  47.06 
 
 
164 aa  133  9.999999999999999e-31  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  42.59 
 
 
164 aa  131  3.9999999999999996e-30  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0995  crossover junction endodeoxyribonuclease RuvC  47.33 
 
 
183 aa  131  6e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.410626  normal 
 
 
-
 
NC_010424  Daud_1364  crossover junction endodeoxyribonuclease RuvC  42.5 
 
 
162 aa  130  7.999999999999999e-30  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.553646  n/a   
 
 
-
 
NC_007005  Psyr_1408  Holliday junction resolvase  46.05 
 
 
174 aa  130  7.999999999999999e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0741674  normal 
 
 
-
 
NC_004578  PSPTO_3979  crossover junction endodeoxyribonuclease RuvC  45.75 
 
 
176 aa  130  1.0000000000000001e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.175883  n/a   
 
 
-
 
NC_007796  Mhun_0890  Holliday junction resolvase  41.4 
 
 
164 aa  129  1.0000000000000001e-29  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0795494 
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  44.67 
 
 
173 aa  129  2.0000000000000002e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  44.23 
 
 
173 aa  127  6e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_011662  Tmz1t_3856  Holliday junction resolvase  43.71 
 
 
183 aa  127  7.000000000000001e-29  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4409  Holliday junction resolvase  47.06 
 
 
175 aa  127  8.000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.049138  normal 
 
 
-
 
NC_013223  Dret_1747  Holliday junction resolvase  40.61 
 
 
170 aa  125  3e-28  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.607448  normal  0.595925 
 
 
-
 
NC_013205  Aaci_2115  crossover junction endodeoxyribonuclease RuvC  45.96 
 
 
184 aa  125  3e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.805464  n/a   
 
 
-
 
NC_011831  Cagg_2595  Holliday junction resolvase  46.05 
 
 
164 aa  124  6e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00143043 
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  44.44 
 
 
176 aa  123  1e-27  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_008009  Acid345_3618  crossover junction endodeoxyribonuclease RuvC  41.29 
 
 
166 aa  123  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.1831  normal  0.457471 
 
 
-
 
NC_007973  Rmet_0426  Holliday junction resolvase  43.14 
 
 
181 aa  122  3e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.633574  normal  0.046933 
 
 
-
 
NC_014212  Mesil_1666  crossover junction endodeoxyribonuclease RuvC  39.74 
 
 
163 aa  122  3e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0719  Holliday junction resolvase  44.51 
 
 
168 aa  121  4e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0957  crossover junction endodeoxyribonuclease RuvC  39.24 
 
 
171 aa  121  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007947  Mfla_2354  Holliday junction resolvase  44.23 
 
 
180 aa  121  4e-27  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.542113 
 
 
-
 
NC_006348  BMA2355  Holliday junction resolvase  45.45 
 
 
180 aa  120  7e-27  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3405  Holliday junction resolvase  45.45 
 
 
180 aa  120  7e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3364  Holliday junction resolvase  45.45 
 
 
180 aa  120  7e-27  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3399  Holliday junction resolvase  45.45 
 
 
180 aa  120  7e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2534  Holliday junction resolvase  45.45 
 
 
180 aa  120  7e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2017  crossover junction endodeoxyribonuclease RuvC  46.41 
 
 
171 aa  120  8e-27  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.365662  normal 
 
 
-
 
NC_007347  Reut_A0486  Holliday junction resolvase  42.48 
 
 
181 aa  120  8e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1864  crossover junction endodeoxyribonuclease RuvC  42.76 
 
 
178 aa  119  1.9999999999999998e-26  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.000897484  n/a   
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  44.67 
 
 
173 aa  119  1.9999999999999998e-26  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_009523  RoseRS_4363  Holliday junction resolvase  41.36 
 
 
168 aa  119  1.9999999999999998e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.140829 
 
 
-
 
NC_008836  BMA10229_A1130  Holliday junction resolvase  45.45 
 
 
275 aa  119  1.9999999999999998e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0268  Holliday junction resolvase  45.45 
 
 
284 aa  119  1.9999999999999998e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0740  Holliday junction resolvase  36.65 
 
 
173 aa  119  1.9999999999999998e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.100777  n/a   
 
 
-
 
NC_007651  BTH_I1249  Holliday junction resolvase  45.45 
 
 
180 aa  119  3e-26  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  42.5 
 
 
161 aa  118  3.9999999999999996e-26  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_011901  Tgr7_2236  Crossover junction endodeoxyribonuclease  46.97 
 
 
179 aa  118  4.9999999999999996e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1218  Holliday junction resolvase  41.06 
 
 
168 aa  118  4.9999999999999996e-26  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.806199 
 
 
-
 
NC_010622  Bphy_2554  Holliday junction resolvase  43.79 
 
 
180 aa  117  6e-26  Burkholderia phymatum STM815  Bacteria  normal  0.250708  normal 
 
 
-
 
NC_013515  Smon_0984  crossover junction endodeoxyribonuclease RuvC  39.1 
 
 
200 aa  117  7.999999999999999e-26  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_1720  crossover junction endodeoxyribonuclease RuvC  43.42 
 
 
166 aa  117  7.999999999999999e-26  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.029168  n/a   
 
 
-
 
NC_008048  Sala_0336  Holliday junction resolvase  41.18 
 
 
156 aa  117  7.999999999999999e-26  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.248302  normal 
 
 
-
 
NC_008740  Maqu_1706  crossover junction endodeoxyribonuclease RuvC  43.79 
 
 
175 aa  117  9e-26  Marinobacter aquaeolei VT8  Bacteria  normal  0.0826466  n/a   
 
 
-
 
NC_011761  AFE_0060  Holliday junction resolvase  46.2 
 
 
166 aa  116  9.999999999999999e-26  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1900  Holliday junction resolvase  43.33 
 
 
173 aa  116  9.999999999999999e-26  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000300533  hitchhiker  0.000114763 
 
 
-
 
NC_008322  Shewmr7_2078  Holliday junction resolvase  43.33 
 
 
173 aa  116  9.999999999999999e-26  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000308371  hitchhiker  0.00162508 
 
 
-
 
NC_010681  Bphyt_3343  Holliday junction resolvase  44.44 
 
 
180 aa  115  1.9999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00888007 
 
 
-
 
NC_011661  Dtur_1614  Holliday junction resolvase  37.09 
 
 
158 aa  115  1.9999999999999998e-25  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1484  Holliday junction resolvase  41.4 
 
 
163 aa  115  1.9999999999999998e-25  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0503  Holliday junction resolvase  41.18 
 
 
181 aa  115  1.9999999999999998e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.46163 
 
 
-
 
NC_003910  CPS_2115  crossover junction endodeoxyribonuclease RuvC  43.8 
 
 
175 aa  116  1.9999999999999998e-25  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1038  Holliday junction resolvase  42.76 
 
 
157 aa  116  1.9999999999999998e-25  Thermosipho melanesiensis BI429  Bacteria  normal  0.0318292  n/a   
 
 
-
 
NC_004347  SO_2431  Holliday junction resolvase  42.67 
 
 
173 aa  116  1.9999999999999998e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_0379  Holliday junction resolvase  40.52 
 
 
181 aa  116  1.9999999999999998e-25  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3776  Holliday junction resolvase  44.81 
 
 
180 aa  116  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  0.518042  normal 
 
 
-
 
NC_012912  Dd1591_2259  Holliday junction resolvase  41.28 
 
 
173 aa  115  1.9999999999999998e-25  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1324  Holliday junction resolvase  40.13 
 
 
189 aa  115  3e-25  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_009719  Plav_2115  crossover junction endodeoxyribonuclease RuvC  39.22 
 
 
175 aa  115  3e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0681536  normal  0.335061 
 
 
-
 
NC_007794  Saro_0421  crossover junction endodeoxyribonuclease RuvC  40.65 
 
 
158 aa  115  3e-25  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.300701  n/a   
 
 
-
 
NC_007951  Bxe_A0617  Holliday junction resolvase  44.44 
 
 
180 aa  115  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.481352 
 
 
-
 
NC_008390  Bamb_0583  Holliday junction resolvase  44.16 
 
 
183 aa  115  3e-25  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1604  crossover junction endodeoxyribonuclease RuvC  40.52 
 
 
192 aa  115  3e-25  Sebaldella termitidis ATCC 33386  Bacteria  decreased coverage  0.0000000814107  n/a   
 
 
-
 
NC_008577  Shewana3_1955  Holliday junction resolvase  43.33 
 
 
173 aa  115  3e-25  Shewanella sp. ANA-3  Bacteria  normal  0.0326541  normal  0.873797 
 
 
-
 
NC_010084  Bmul_2694  Holliday junction resolvase  43.51 
 
 
180 aa  115  3e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.218252  normal  0.976349 
 
 
-
 
NC_011206  Lferr_0061  Holliday junction resolvase  45.51 
 
 
185 aa  115  3e-25  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0317029  normal  0.843846 
 
 
-
 
NC_007908  Rfer_3417  Holliday junction resolvase  42.58 
 
 
182 aa  114  3.9999999999999997e-25  Rhodoferax ferrireducens T118  Bacteria  normal  0.124566  n/a   
 
 
-
 
NC_007954  Sden_1885  Holliday junction resolvase  42.67 
 
 
173 aa  115  3.9999999999999997e-25  Shewanella denitrificans OS217  Bacteria  normal  0.94551  n/a   
 
 
-
 
NC_009438  Sputcn32_1937  Holliday junction resolvase  42.67 
 
 
173 aa  115  3.9999999999999997e-25  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00155576  n/a   
 
 
-
 
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