Gene Coch_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0079 
SymbolruvC 
ID8366481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp102122 
End bp102667 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content42% 
IMG OID644982498 
ProductHolliday junction resolvase 
Protein accessionYP_003140205 
Protein GI256818926 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACGCA TTATTTTAGG TATCGACCCA GGCACTACTA TTATGGGGTT TGGGCTTATT 
CAGGTGGAAA GAGATACTAT GAAGCTCTTA CAGCTGAATG AGCTTCAACT TAGTAAATAC
AGCAATCACT ACTTAAAACT AAGTGTGATT TTTAATCGCA CTTTGGAGCT GATAGATACC
TATAAGCCTG ATGAATTGGC TATTGAAGCG CCCTTCTTTG GCAAGAACGT ACAATCGATG
TTGAAACTCG GAAGAGCGCA GGGAGTGGCG ATGGCAGCGG GGCTATCGCG TGAAATTCCT
ATTACTGAAT ACGAACCTAA AAAGGTGAAA ATGGCTATTA CGGGTAATGG TAGTGCCTCC
AAGGAACAAG TAGCTAAAAT GCTTCAACAA CTTCTGAATA TAAAAGAACT CCCCAAACAC
TTTGACGCAA CTGACGGTCT GGCGGTGGCT GTTTGTCACT TTTTTAACGG AGGCAAGTCG
CAAAAGCAAC AAAGTTATAG TGGTTGGGAC GCTTTTGTAA AACAAAATCA AGACCGTATA
GGTTAA
 
Protein sequence
MERIILGIDP GTTIMGFGLI QVERDTMKLL QLNELQLSKY SNHYLKLSVI FNRTLELIDT 
YKPDELAIEA PFFGKNVQSM LKLGRAQGVA MAAGLSREIP ITEYEPKKVK MAITGNGSAS
KEQVAKMLQQ LLNIKELPKH FDATDGLAVA VCHFFNGGKS QKQQSYSGWD AFVKQNQDRI
G