Gene CHU_2183 details

Gene Information

• Locus tag: CHU_2183
• Symbol: ruvC
• ID: 4183932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: +
• Start bp: 2538467
• End bp: 2539069
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638072185
• Product: Holliday junction resolvase
• Protein accession: YP_678789
• Protein GI: 110638579
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.198911
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTCAACA AAAATTCTCC CAAAACAATT GATCGGATCA TTCTCGGTGT AGACCCCGGA 
ACGAATGTGA TGGGTTATGG ACTTATTGCT ATTAAAGGAA CTCAATTGAC ATTGATTCAA 
TTTGGTGTTA TTCATTTGAG CAAATACACG GACCATGCAA TAAAGTTAAG TAAAATCTTT 
GAGAGGATAA GCCTTCTGAT CGAAGAGTAT CATCCCGATG AAATGGCCAT TGAAGCTCCT 
TTCTTCGGCT CAAATGTGCA ATCCATGTTA AAGCTTGGGC GTGCACAGGG TGTAGCAATT 
GCCGCAGCTA TTTCAAAGCA GGTTCCTATT TTTGAATATG CACCAAAAAA AATAAAACAA 
TCGGTAACCG GCAGCGGAAA TGCTTCAAAA GAGCAGGTAG CAGCCATGCT TTCTAAAATT 
TTATTTTTTC AGGAGATCCC TAAATTGCTT GATGCAACGG ATGCCCTCGG CGTTGCCGTA 
TGCCATTACT TCCAAAAGGG TGATGTTAAA AAAAGTAAAG GCGGATGGAA TAATTTCATT 
AAAGAGAATC CCGACAAAGT AAAAACTGTA CCTGCCAAAA TAAGTAAAAA AAAAACTGAC 
TAA 

 

Protein sequence

MVNKNSPKTI DRIILGVDPG TNVMGYGLIA IKGTQLTLIQ FGVIHLSKYT DHAIKLSKIF 
ERISLLIEEY HPDEMAIEAP FFGSNVQSML KLGRAQGVAI AAAISKQVPI FEYAPKKIKQ 
SVTGSGNASK EQVAAMLSKI LFFQEIPKLL DATDALGVAV CHYFQKGDVK KSKGGWNNFI 
KENPDKVKTV PAKISKKKTD