More than 300 homologs were found in PanDaTox collection
for query gene CHU_2183 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_2183  Holliday junction resolvase  100 
 
 
200 aa  407  1e-113  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.198911 
 
 
-
 
NC_013730  Slin_2240  crossover junction endodeoxyribonuclease RuvC  57.46 
 
 
182 aa  226  2e-58  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0079  Holliday junction resolvase  57.22 
 
 
181 aa  225  4e-58  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1377  Holliday junction resolvase  58.79 
 
 
184 aa  223  1e-57  Flavobacterium johnsoniae UW101  Bacteria  normal  0.180632  n/a   
 
 
-
 
NC_013061  Phep_0400  crossover junction endodeoxyribonuclease RuvC  56.35 
 
 
187 aa  223  1e-57  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.253093 
 
 
-
 
NC_002950  PG1324  Holliday junction resolvase  56.54 
 
 
189 aa  220  9.999999999999999e-57  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_014230  CA2559_04920  Holliday junction resolvase  55.87 
 
 
184 aa  216  2e-55  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1243  crossover junction endodeoxyribonuclease RuvC  56.67 
 
 
202 aa  216  2.9999999999999998e-55  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_0769  Holliday junction resolvase  54.55 
 
 
182 aa  211  4.9999999999999996e-54  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_013037  Dfer_2024  crossover junction endodeoxyribonuclease RuvC  58.05 
 
 
174 aa  208  4e-53  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.270217  normal 
 
 
-
 
NC_013501  Rmar_2400  crossover junction endodeoxyribonuclease RuvC  42.55 
 
 
191 aa  173  9.999999999999999e-43  Rhodothermus marinus DSM 4252  Bacteria  normal  0.553379  n/a   
 
 
-
 
NC_011060  Ppha_0658  crossover junction endodeoxyribonuclease RuvC  40.22 
 
 
191 aa  154  7e-37  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.545827  n/a   
 
 
-
 
NC_007512  Plut_1642  crossover junction endodeoxyribonuclease RuvC  40.22 
 
 
191 aa  149  3e-35  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  46.98 
 
 
164 aa  145  3e-34  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  44.16 
 
 
164 aa  140  9.999999999999999e-33  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_011059  Paes_0497  crossover junction endodeoxyribonuclease RuvC  36.76 
 
 
187 aa  139  3.9999999999999997e-32  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.655461  normal 
 
 
-
 
NC_007514  Cag_0164  crossover junction endodeoxyribonuclease RuvC  35.45 
 
 
192 aa  139  3.9999999999999997e-32  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  40.46 
 
 
176 aa  138  4.999999999999999e-32  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  44.97 
 
 
171 aa  137  1e-31  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  42.95 
 
 
164 aa  135  3.0000000000000003e-31  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  39.24 
 
 
182 aa  135  5e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  44.74 
 
 
161 aa  134  9.999999999999999e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  38.56 
 
 
179 aa  129  3e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_009455  DehaBAV1_0420  crossover junction endodeoxyribonuclease RuvC  44.81 
 
 
167 aa  128  5.0000000000000004e-29  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  41.94 
 
 
164 aa  127  1.0000000000000001e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_010622  Bphy_2554  Holliday junction resolvase  46.31 
 
 
180 aa  127  1.0000000000000001e-28  Burkholderia phymatum STM815  Bacteria  normal  0.250708  normal 
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  43.33 
 
 
173 aa  127  1.0000000000000001e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  41.94 
 
 
164 aa  127  1.0000000000000001e-28  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1221  crossover junction endodeoxyribonuclease RuvC  42.48 
 
 
165 aa  126  2.0000000000000002e-28  Methylococcus capsulatus str. Bath  Bacteria  normal  0.69785  n/a   
 
 
-
 
NC_010803  Clim_0476  crossover junction endodeoxyribonuclease RuvC  35.83 
 
 
190 aa  126  2.0000000000000002e-28  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  39.33 
 
 
163 aa  125  3e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  39.33 
 
 
165 aa  126  3e-28  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_008639  Cpha266_0539  crossover junction endodeoxyribonuclease RuvC  33.7 
 
 
187 aa  125  3e-28  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  38.67 
 
 
159 aa  125  4.0000000000000003e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  45.7 
 
 
173 aa  125  5e-28  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  43.71 
 
 
173 aa  125  6e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  45.33 
 
 
173 aa  125  6e-28  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  42.67 
 
 
173 aa  124  7e-28  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  43.33 
 
 
173 aa  124  8.000000000000001e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_004347  SO_2431  Holliday junction resolvase  47.68 
 
 
173 aa  124  9e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009080  BMA10247_2534  Holliday junction resolvase  41.36 
 
 
180 aa  124  1e-27  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2355  Holliday junction resolvase  41.36 
 
 
180 aa  124  1e-27  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1130  Holliday junction resolvase  41.36 
 
 
275 aa  124  1e-27  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3405  Holliday junction resolvase  41.36 
 
 
180 aa  124  1e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  40.67 
 
 
167 aa  124  1e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_007651  BTH_I1249  Holliday junction resolvase  40.74 
 
 
180 aa  124  1e-27  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3399  Holliday junction resolvase  41.36 
 
 
180 aa  124  1e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1900  Holliday junction resolvase  47.02 
 
 
173 aa  124  1e-27  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000300533  hitchhiker  0.000114763 
 
 
-
 
NC_008322  Shewmr7_2078  Holliday junction resolvase  47.02 
 
 
173 aa  124  1e-27  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000308371  hitchhiker  0.00162508 
 
 
-
 
NC_008785  BMASAVP1_A0268  Holliday junction resolvase  41.36 
 
 
284 aa  124  1e-27  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0543  crossover junction endodeoxyribonuclease RuvC  35.83 
 
 
186 aa  123  2e-27  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3364  Holliday junction resolvase  41.36 
 
 
180 aa  123  2e-27  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2694  Holliday junction resolvase  37.71 
 
 
180 aa  123  2e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.218252  normal  0.976349 
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  43.33 
 
 
173 aa  123  2e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  38.67 
 
 
165 aa  122  3e-27  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_008390  Bamb_0583  Holliday junction resolvase  42.28 
 
 
183 aa  122  4e-27  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0995  crossover junction endodeoxyribonuclease RuvC  42.21 
 
 
183 aa  122  4e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.410626  normal 
 
 
-
 
NC_008577  Shewana3_1955  Holliday junction resolvase  47.02 
 
 
173 aa  122  4e-27  Shewanella sp. ANA-3  Bacteria  normal  0.0326541  normal  0.873797 
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  35.29 
 
 
160 aa  122  4e-27  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_010551  BamMC406_0609  Holliday junction resolvase  42.28 
 
 
183 aa  121  6e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.385188  normal  0.439523 
 
 
-
 
NC_013552  DhcVS_385  crossover junction endodeoxyribonuclease  43.51 
 
 
165 aa  121  7e-27  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0207  Holliday junction resolvase  37.14 
 
 
180 aa  121  7e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0690  Holliday junction resolvase  37.14 
 
 
180 aa  121  7e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3343  Holliday junction resolvase  43.62 
 
 
180 aa  121  8e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00888007 
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  38.67 
 
 
162 aa  121  9e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3776  Holliday junction resolvase  37.14 
 
 
180 aa  120  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  0.518042  normal 
 
 
-
 
NC_007951  Bxe_A0617  Holliday junction resolvase  43.62 
 
 
180 aa  120  9.999999999999999e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.481352 
 
 
-
 
NC_002936  DET0443  crossover junction endodeoxyribonuclease RuvC  42.86 
 
 
165 aa  119  1.9999999999999998e-26  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  37.58 
 
 
164 aa  120  1.9999999999999998e-26  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0657  Holliday junction resolvase  36.57 
 
 
180 aa  119  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0890  Holliday junction resolvase  37.42 
 
 
164 aa  119  3e-26  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0795494 
 
 
-
 
NC_013223  Dret_1747  Holliday junction resolvase  37.42 
 
 
170 aa  119  3e-26  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.607448  normal  0.595925 
 
 
-
 
NC_009092  Shew_2077  Holliday junction resolvase  45.7 
 
 
173 aa  119  3.9999999999999996e-26  Shewanella loihica PV-4  Bacteria  normal  0.414118  normal 
 
 
-
 
NC_009436  Ent638_2431  Holliday junction resolvase  44.12 
 
 
173 aa  119  3.9999999999999996e-26  Enterobacter sp. 638  Bacteria  normal  0.0114674  normal 
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  38 
 
 
166 aa  119  3.9999999999999996e-26  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_009438  Sputcn32_1937  Holliday junction resolvase  43.51 
 
 
173 aa  117  7.999999999999999e-26  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00155576  n/a   
 
 
-
 
NC_009712  Mboo_0111  Holliday junction resolvase  37.75 
 
 
156 aa  117  9.999999999999999e-26  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_008309  HS_0509  Holliday junction resolvase  42.34 
 
 
189 aa  117  9.999999999999999e-26  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0486  Holliday junction resolvase  41.61 
 
 
181 aa  116  1.9999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2032  Holliday junction resolvase  44.37 
 
 
173 aa  117  1.9999999999999998e-25  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00302461  normal 
 
 
-
 
NC_003295  RSc0503  Holliday junction resolvase  39.6 
 
 
181 aa  115  3.9999999999999997e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.46163 
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  41.61 
 
 
161 aa  115  3.9999999999999997e-25  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_007954  Sden_1885  Holliday junction resolvase  44.37 
 
 
173 aa  115  3.9999999999999997e-25  Shewanella denitrificans OS217  Bacteria  normal  0.94551  n/a   
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  37.91 
 
 
180 aa  115  6e-25  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_013421  Pecwa_2102  Holliday junction resolvase  40.26 
 
 
173 aa  115  6e-25  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2305  Holliday junction resolvase  44.37 
 
 
173 aa  114  7.999999999999999e-25  Shewanella baltica OS185  Bacteria  hitchhiker  0.00234267  n/a   
 
 
-
 
NC_009997  Sbal195_2421  Holliday junction resolvase  44.37 
 
 
173 aa  114  7.999999999999999e-25  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000504743  normal  0.0281023 
 
 
-
 
NC_009675  Anae109_0992  crossover junction endodeoxyribonuclease RuvC  39.61 
 
 
206 aa  114  7.999999999999999e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0391793  normal 
 
 
-
 
NC_011663  Sbal223_2042  Holliday junction resolvase  44.37 
 
 
173 aa  114  7.999999999999999e-25  Shewanella baltica OS223  Bacteria  hitchhiker  0.000214475  hitchhiker  0.0000000571856 
 
 
-
 
NC_009052  Sbal_2040  Holliday junction resolvase  44.37 
 
 
173 aa  114  7.999999999999999e-25  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000000885772  n/a   
 
 
-
 
NC_011080  SNSL254_A2057  Holliday junction resolvase  44.19 
 
 
173 aa  114  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0681914 
 
 
-
 
NC_011083  SeHA_C2112  Holliday junction resolvase  44.19 
 
 
173 aa  114  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0214105 
 
 
-
 
NC_011205  SeD_A1349  Holliday junction resolvase  44.19 
 
 
173 aa  114  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.00353939 
 
 
-
 
NC_011094  SeSA_A2052  Holliday junction resolvase  44.19 
 
 
173 aa  114  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1225  Holliday junction resolvase  44.19 
 
 
173 aa  114  8.999999999999998e-25  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.177509  n/a   
 
 
-
 
NC_010682  Rpic_0379  Holliday junction resolvase  38.93 
 
 
181 aa  114  8.999999999999998e-25  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_1777  crossover junction endodeoxyribonuclease RuvC  44.19 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli DH1  Bacteria  hitchhiker  0.00202932  n/a   
 
 
-
 
NC_010498  EcSMS35_1323  Holliday junction resolvase  44.19 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E1109  Holliday junction resolvase  44.19 
 
 
173 aa  113  1.0000000000000001e-24  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2599  Holliday junction resolvase  44.19 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.109079  normal 
 
 
-
 
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