Gene Rpic12D_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0394 
SymbolruvC 
ID8018019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp409442 
End bp409987 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID644829173 
ProductHolliday junction resolvase 
Protein accessionYP_002980372 
Protein GI241662012 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.638558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC TCGGCATCGA TCCCGGCCTT CGCACCACGG GTTTCGGCGT GCTCGAACGG 
CACGGGCACA AGCTCGTCTA CGTGGCCTCG GGCACGATCA AGAGCAATGG CAATGCCGAC
CTGCCCAGCC GTCTGAAGAC GCTGTATGAC GGGGTGTCTG AGCTGGTGAG CACATACCGG
CCGGACTGCG CTTCCATCGA AAAGGTGTTC GTCAACGTCA ACCCGCAATC GACGCTGCTG
CTGGGCCAGG CCCGCGGCGC GGTGATCTGC GGCCTGATGA GCGGCAACCT GCCCGTGTTC
GAGTACACCG CGCTGCAGCT GAAGCAGGCC GTGGTCGGCT ATGGCCGCGC CAACAAGGAC
CAGGTGCAGG AAATGGTCGT GCGCTTGCTC AACCTCGCAG GCAGACCGGG CGCCGATGCG
TCCGACGCGC TGGGCGTGGC GATCTGCCAT GCGCACGGCG GCGAGACGCT GGCCGCCATG
GCTGGTCTGG CGCCGCAGCT TGCGCAAAAG GGGCTGCGCG TGCGGCGCGG CCGCCTCGTC
GGCTGA
 
Protein sequence
MRILGIDPGL RTTGFGVLER HGHKLVYVAS GTIKSNGNAD LPSRLKTLYD GVSELVSTYR 
PDCASIEKVF VNVNPQSTLL LGQARGAVIC GLMSGNLPVF EYTALQLKQA VVGYGRANKD
QVQEMVVRLL NLAGRPGADA SDALGVAICH AHGGETLAAM AGLAPQLAQK GLRVRRGRLV
G