More than 300 homologs were found in PanDaTox collection
for query gene Slin_2240 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_2240  crossover junction endodeoxyribonuclease RuvC  100 
 
 
182 aa  378  1e-104  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2183  Holliday junction resolvase  57.46 
 
 
200 aa  226  1e-58  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.198911 
 
 
-
 
NC_013037  Dfer_2024  crossover junction endodeoxyribonuclease RuvC  62.79 
 
 
174 aa  217  8.999999999999998e-56  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.270217  normal 
 
 
-
 
NC_013162  Coch_0079  Holliday junction resolvase  55.43 
 
 
181 aa  208  4e-53  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0400  crossover junction endodeoxyribonuclease RuvC  52.49 
 
 
187 aa  203  1e-51  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.253093 
 
 
-
 
NC_002950  PG1324  Holliday junction resolvase  52.72 
 
 
189 aa  196  2.0000000000000003e-49  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_014230  CA2559_04920  Holliday junction resolvase  52.2 
 
 
184 aa  196  2.0000000000000003e-49  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1377  Holliday junction resolvase  54.14 
 
 
184 aa  194  5.000000000000001e-49  Flavobacterium johnsoniae UW101  Bacteria  normal  0.180632  n/a   
 
 
-
 
NC_010830  Aasi_0769  Holliday junction resolvase  50 
 
 
182 aa  193  1e-48  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_1243  crossover junction endodeoxyribonuclease RuvC  48.35 
 
 
202 aa  189  2e-47  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2400  crossover junction endodeoxyribonuclease RuvC  40.44 
 
 
191 aa  157  8e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  0.553379  n/a   
 
 
-
 
NC_011060  Ppha_0658  crossover junction endodeoxyribonuclease RuvC  37.3 
 
 
191 aa  140  9e-33  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.545827  n/a   
 
 
-
 
NC_007512  Plut_1642  crossover junction endodeoxyribonuclease RuvC  36.22 
 
 
191 aa  139  1.9999999999999998e-32  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  43.71 
 
 
164 aa  134  5e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_010831  Cphamn1_0543  crossover junction endodeoxyribonuclease RuvC  36.51 
 
 
186 aa  134  7.000000000000001e-31  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0476  crossover junction endodeoxyribonuclease RuvC  39.13 
 
 
190 aa  132  3.9999999999999996e-30  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  42 
 
 
161 aa  132  3.9999999999999996e-30  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  42.67 
 
 
163 aa  131  5e-30  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  41.72 
 
 
171 aa  129  3e-29  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  42.28 
 
 
164 aa  129  3e-29  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  41.06 
 
 
164 aa  128  4.0000000000000003e-29  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  41.03 
 
 
182 aa  128  4.0000000000000003e-29  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  39.88 
 
 
173 aa  128  4.0000000000000003e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_007514  Cag_0164  crossover junction endodeoxyribonuclease RuvC  34.39 
 
 
192 aa  128  5.0000000000000004e-29  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0497  crossover junction endodeoxyribonuclease RuvC  34.22 
 
 
187 aa  125  3e-28  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.655461  normal 
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  40 
 
 
167 aa  125  3e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  39.53 
 
 
173 aa  125  3e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_0995  crossover junction endodeoxyribonuclease RuvC  43.33 
 
 
183 aa  125  3e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.410626  normal 
 
 
-
 
NC_013552  DhcVS_385  crossover junction endodeoxyribonuclease  41.45 
 
 
165 aa  124  6e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  38.85 
 
 
164 aa  124  6e-28  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0420  crossover junction endodeoxyribonuclease RuvC  40.67 
 
 
167 aa  124  9e-28  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  41.4 
 
 
165 aa  123  1e-27  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  40 
 
 
166 aa  123  1e-27  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_002936  DET0443  crossover junction endodeoxyribonuclease RuvC  40.79 
 
 
165 aa  123  2e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  40 
 
 
173 aa  123  2e-27  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  40 
 
 
162 aa  123  2e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  35.84 
 
 
176 aa  123  2e-27  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  39.16 
 
 
173 aa  122  2e-27  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_009712  Mboo_0111  Holliday junction resolvase  39.33 
 
 
156 aa  121  4e-27  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  40 
 
 
165 aa  121  5e-27  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  36.2 
 
 
180 aa  121  5e-27  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_013223  Dret_1747  Holliday junction resolvase  37.75 
 
 
170 aa  120  7e-27  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.607448  normal  0.595925 
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  38.67 
 
 
160 aa  120  7e-27  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  38.37 
 
 
173 aa  120  7e-27  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_002977  MCA1221  crossover junction endodeoxyribonuclease RuvC  37.18 
 
 
165 aa  120  8e-27  Methylococcus capsulatus str. Bath  Bacteria  normal  0.69785  n/a   
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  40.67 
 
 
173 aa  120  9.999999999999999e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_008639  Cpha266_0539  crossover junction endodeoxyribonuclease RuvC  34.25 
 
 
187 aa  120  9.999999999999999e-27  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4409  Holliday junction resolvase  38.82 
 
 
175 aa  119  1.9999999999999998e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.049138  normal 
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  39.26 
 
 
173 aa  119  1.9999999999999998e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  39.47 
 
 
164 aa  119  3e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  39.47 
 
 
164 aa  119  3e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_007005  Psyr_1408  Holliday junction resolvase  37.28 
 
 
174 aa  118  4.9999999999999996e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0741674  normal 
 
 
-
 
NC_006369  lpl1250  Holliday junction resolvase  40.72 
 
 
174 aa  117  9.999999999999999e-26  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  37.58 
 
 
159 aa  117  9.999999999999999e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  35.98 
 
 
179 aa  117  9.999999999999999e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_004347  SO_2431  Holliday junction resolvase  39.88 
 
 
173 aa  116  1.9999999999999998e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_3979  crossover junction endodeoxyribonuclease RuvC  37.06 
 
 
176 aa  115  3e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.175883  n/a   
 
 
-
 
NC_006368  lpp1250  Holliday junction resolvase  43.71 
 
 
174 aa  115  3e-25  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1900  Holliday junction resolvase  39.31 
 
 
173 aa  115  3e-25  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000300533  hitchhiker  0.000114763 
 
 
-
 
NC_008322  Shewmr7_2078  Holliday junction resolvase  39.31 
 
 
173 aa  115  3e-25  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000308371  hitchhiker  0.00162508 
 
 
-
 
NC_008751  Dvul_0987  Holliday junction resolvase  37.58 
 
 
166 aa  115  3e-25  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.221378 
 
 
-
 
NC_013173  Dbac_3491  Holliday junction resolvase  37.95 
 
 
173 aa  114  6.9999999999999995e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3179  crossover junction endodeoxyribonuclease RuvC  36.25 
 
 
164 aa  114  7.999999999999999e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal 
 
 
-
 
NC_008577  Shewana3_1955  Holliday junction resolvase  39.31 
 
 
173 aa  114  7.999999999999999e-25  Shewanella sp. ANA-3  Bacteria  normal  0.0326541  normal  0.873797 
 
 
-
 
NC_011662  Tmz1t_3856  Holliday junction resolvase  36.31 
 
 
183 aa  114  8.999999999999998e-25  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_01834  Holliday junction resolvase  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli BL21(DE3)  Bacteria  normal  0.837934  n/a   
 
 
-
 
CP001637  EcDH1_1777  crossover junction endodeoxyribonuclease RuvC  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli DH1  Bacteria  hitchhiker  0.00202932  n/a   
 
 
-
 
NC_012892  B21_01822  hypothetical protein  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli BL21  Bacteria  normal  0.621329  n/a   
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  40.62 
 
 
161 aa  113  1.0000000000000001e-24  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_009438  Sputcn32_1937  Holliday junction resolvase  38.32 
 
 
173 aa  113  1.0000000000000001e-24  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00155576  n/a   
 
 
-
 
NC_009800  EcHS_A1956  Holliday junction resolvase  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli HS  Bacteria  normal  0.396234  n/a   
 
 
-
 
NC_011353  ECH74115_2599  Holliday junction resolvase  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.109079  normal 
 
 
-
 
NC_010498  EcSMS35_1323  Holliday junction resolvase  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1769  Holliday junction resolvase  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Escherichia coli ATCC 8739  Bacteria  normal  0.0125353  normal 
 
 
-
 
NC_009616  Tmel_1038  Holliday junction resolvase  42.57 
 
 
157 aa  113  1.0000000000000001e-24  Thermosipho melanesiensis BI429  Bacteria  normal  0.0318292  n/a   
 
 
-
 
NC_010658  SbBS512_E1109  Holliday junction resolvase  35.76 
 
 
173 aa  113  1.0000000000000001e-24  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2112  Holliday junction resolvase  35.76 
 
 
173 aa  112  2.0000000000000002e-24  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0214105 
 
 
-
 
NC_011094  SeSA_A2052  Holliday junction resolvase  35.76 
 
 
173 aa  112  2.0000000000000002e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0892  crossover junction endodeoxyribonuclease RuvC  42.22 
 
 
172 aa  113  2.0000000000000002e-24  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00082317  n/a   
 
 
-
 
NC_011205  SeD_A1349  Holliday junction resolvase  35.76 
 
 
173 aa  112  2.0000000000000002e-24  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.00353939 
 
 
-
 
NC_009656  PSPA7_4543  Holliday junction resolvase  35.22 
 
 
174 aa  112  2.0000000000000002e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1225  Holliday junction resolvase  35.76 
 
 
173 aa  112  2.0000000000000002e-24  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.177509  n/a   
 
 
-
 
NC_011080  SNSL254_A2057  Holliday junction resolvase  35.76 
 
 
173 aa  112  2.0000000000000002e-24  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0681914 
 
 
-
 
NC_009524  PsycPRwf_1433  Holliday junction resolvase  35.87 
 
 
194 aa  112  2.0000000000000002e-24  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2093  Holliday junction resolvase  35.15 
 
 
173 aa  112  4.0000000000000004e-24  Escherichia coli E24377A  Bacteria  hitchhiker  0.00029798  n/a   
 
 
-
 
NC_009654  Mmwyl1_2188  crossover junction endodeoxyribonuclease RuvC  41.48 
 
 
185 aa  112  4.0000000000000004e-24  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000240809  normal  0.361233 
 
 
-
 
NC_009436  Ent638_2431  Holliday junction resolvase  34.97 
 
 
173 aa  112  4.0000000000000004e-24  Enterobacter sp. 638  Bacteria  normal  0.0114674  normal 
 
 
-
 
NC_008309  HS_0509  Holliday junction resolvase  39.71 
 
 
189 aa  112  4.0000000000000004e-24  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2421  Holliday junction resolvase  38.46 
 
 
173 aa  111  5e-24  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000504743  normal  0.0281023 
 
 
-
 
NC_009665  Shew185_2305  Holliday junction resolvase  38.46 
 
 
173 aa  111  5e-24  Shewanella baltica OS185  Bacteria  hitchhiker  0.00234267  n/a   
 
 
-
 
NC_011663  Sbal223_2042  Holliday junction resolvase  38.46 
 
 
173 aa  111  5e-24  Shewanella baltica OS223  Bacteria  hitchhiker  0.000214475  hitchhiker  0.0000000571856 
 
 
-
 
NC_009052  Sbal_2040  Holliday junction resolvase  38.46 
 
 
173 aa  111  5e-24  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000000885772  n/a   
 
 
-
 
NC_009767  Rcas_0719  Holliday junction resolvase  40.67 
 
 
168 aa  110  7.000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1878  Holliday junction resolvase  35.71 
 
 
172 aa  111  7.000000000000001e-24  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.00784729  n/a   
 
 
-
 
NC_009074  BURPS668_3364  Holliday junction resolvase  37.18 
 
 
180 aa  110  9e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0379  Holliday junction resolvase  37.58 
 
 
181 aa  110  9e-24  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2032  Holliday junction resolvase  36.99 
 
 
173 aa  110  1.0000000000000001e-23  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00302461  normal 
 
 
-
 
NC_009076  BURPS1106A_3399  Holliday junction resolvase  37.18 
 
 
180 aa  110  1.0000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3405  Holliday junction resolvase  37.18 
 
 
180 aa  110  1.0000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1270  Holliday junction resolvase  37.58 
 
 
174 aa  110  1.0000000000000001e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.460583  normal  0.748169 
 
 
-
 
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