Gene PSPTO_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3979 
SymbolruvC 
ID1185655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4485374 
End bp4485904 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID637395326 
Productcrossover junction endodeoxyribonuclease RuvC 
Protein accessionNP_793743 
Protein GI28871124 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.175883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTTA TTCTTGGTAT CGACCCCGGT TCGCGAATCA CCGGCTATGG CGTGGTGCGT 
GACACCGGGC GTGGCTGCGT TTACGTGGCC TCGGGGTGTA TTCGCACCGG CACCGGCAGC
GGCGAGCTGC ATGAGCGTTT GCAGATCGTC TATCGTGGTG TGCGTGAGGT CATCAAGACC
TACGGGCCCG TGACGATGGG CATCGAAAAG GTGTTCATGG CGCGCAATGC CGATTCGGCG
CTCAAGCTGG GGCAGGCGAG GGGGGCGGCT ATCGTCGCAG GGGCCGAAGA GGCACTGGAA
ATCGCCGAGT ACACAGCCAC TCAGGTCAAA CAGGCGGTGG CCGGGACGGG CGGGGCCAAT
AAAGAGCAGG TAATGATGAT GGTCATGCAT CTGCTCAAAC TGACCCAGAA GCCGCAAATC
GATGCGTCCG ATGCCCTCGC CATCGCGTTG TGTCACGCAC ACACGCGTTC CAGTCTGATT
CCCCACGGGC TGGGCACGGC GCGCAGTCGT GGCGGTCGGT TAAGGCTCTG A
 
Protein sequence
MTLILGIDPG SRITGYGVVR DTGRGCVYVA SGCIRTGTGS GELHERLQIV YRGVREVIKT 
YGPVTMGIEK VFMARNADSA LKLGQARGAA IVAGAEEALE IAEYTATQVK QAVAGTGGAN
KEQVMMMVMH LLKLTQKPQI DASDALAIAL CHAHTRSSLI PHGLGTARSR GGRLRL