Gene PSPTO_3979 details

Gene Information

• Locus tag: PSPTO_3979
• Symbol: ruvC
• ID: 1185655
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 4485374
• End bp: 4485904
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637395326
• Product: crossover junction endodeoxyribonuclease RuvC
• Protein accession: NP_793743
• Protein GI: 28871124
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.175883
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCTTA TTCTTGGTAT CGACCCCGGT TCGCGAATCA CCGGCTATGG CGTGGTGCGT 
GACACCGGGC GTGGCTGCGT TTACGTGGCC TCGGGGTGTA TTCGCACCGG CACCGGCAGC 
GGCGAGCTGC ATGAGCGTTT GCAGATCGTC TATCGTGGTG TGCGTGAGGT CATCAAGACC 
TACGGGCCCG TGACGATGGG CATCGAAAAG GTGTTCATGG CGCGCAATGC CGATTCGGCG 
CTCAAGCTGG GGCAGGCGAG GGGGGCGGCT ATCGTCGCAG GGGCCGAAGA GGCACTGGAA 
ATCGCCGAGT ACACAGCCAC TCAGGTCAAA CAGGCGGTGG CCGGGACGGG CGGGGCCAAT 
AAAGAGCAGG TAATGATGAT GGTCATGCAT CTGCTCAAAC TGACCCAGAA GCCGCAAATC 
GATGCGTCCG ATGCCCTCGC CATCGCGTTG TGTCACGCAC ACACGCGTTC CAGTCTGATT 
CCCCACGGGC TGGGCACGGC GCGCAGTCGT GGCGGTCGGT TAAGGCTCTG A 

 

Protein sequence

MTLILGIDPG SRITGYGVVR DTGRGCVYVA SGCIRTGTGS GELHERLQIV YRGVREVIKT 
YGPVTMGIEK VFMARNADSA LKLGQARGAA IVAGAEEALE IAEYTATQVK QAVAGTGGAN 
KEQVMMMVMH LLKLTQKPQI DASDALAIAL CHAHTRSSLI PHGLGTARSR GGRLRL