Gene Shewmr4_1900 details

Gene Information

• Locus tag: Shewmr4_1900
• Symbol: ruvC
• ID: 4252474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-4
• Kingdom: Bacteria
• Replicon accession: NC_008321
• Strand: +
• Start bp: 2264734
• End bp: 2265255
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 638118511
• Product: Holliday junction resolvase
• Protein accession: YP_734031
• Protein GI: 113970238
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000300533
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.000114763
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCGATTA TTTTAGGGGT TGACCCAGGT TCTCGGATCA CAGGTTACGG CGTTATCCAA 
TGCCAAGGGC GGCAGCAACT TTATTTGGGC AGCGGCTGCA TTCGCACCTC GGGTGAGGAT 
TTACCATTAA GACTCAAGCA AATCTTTGAT GGGATCAGTG AAATTATTCG CCAATACCAA 
CCCGATGAAT TTGCGATTGA GCGAGTGTTT CTCGCCAAGA ATGCCGACTC GGCCTTGAAA 
TTGGGCCAAG CCCGTGGTGC GGCCATCGTG GCTGCAACAG TGGCCAACTT ACCCGTTGCC 
GAATACAGTG CCACCCAAAT TAAGAATGCG GTGGTCGGAA CGGGGCGAGC CAAGAAAGAA 
CAGGTTCAAC ATATGATCCA GCAATTACTT AAGCTGCCCG CGGCGCCACA GGCCGACGCT 
GCGGATGCGC TTGGCGTTGC GGTATGTCAT TATCACACCA ATCAAAGTTT GGTCGCCTTA 
AGCGGCCGAG CGACAACAAG AACATATGGA CGGTACAGAT GA 

 

Protein sequence

MAIILGVDPG SRITGYGVIQ CQGRQQLYLG SGCIRTSGED LPLRLKQIFD GISEIIRQYQ 
PDEFAIERVF LAKNADSALK LGQARGAAIV AATVANLPVA EYSATQIKNA VVGTGRAKKE 
QVQHMIQQLL KLPAAPQADA ADALGVAVCH YHTNQSLVAL SGRATTRTYG RYR