Gene Pnuc_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1878 
SymbolruvC 
ID5052148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1954340 
End bp1954858 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content52% 
IMG OID640472051 
ProductHolliday junction resolvase 
Protein accessionYP_001156654 
Protein GI145590057 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00784729 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTGGA TTGGAATCGA CCCGGGATTG CGTATTACTG GCTTTGGCGT CATTGATGTC 
GATGGCCAAA AACTGACTTA CGTAGCTTCA GGGACGATTG AAAGTGGCGA TCCTGCCAAA
GGCTTGCCAG AGCGTCTCGG CGCTCTCTAT GCCGGCGTTA AAGAAGTTCT AGAAACCTAT
CGACCAGAGC AAGCTGCAAT TGAAGAAGTT TTCTTAAACG TCAATCCACG CTCAACCCTG
ATGCTTGGAC AAGCCCGGGG GGCAGTAATC GCAGCCCTTG TCTCAGAAAA ACTACCGGTT
GCTGAATACA GTGCCTTGAG AGTGAAGCAA GCGATTGTAG GAACTGGCCG CGCAGCCAAA
CCGCAAGTCC AAGAAATGGT AAAACGCCTA CTCCGACTGA GTCGCGCCCC AGGAACGGAT
GCTTCGGACG CATTAGGTGT GGCTATTTGC GCCGCGCACC ATTCACAAAT ACCAAAAGCA
ATTACCTCGG CATTAGCCTC CAAGAAACGC AGCAAGTAA
 
Protein sequence
MRWIGIDPGL RITGFGVIDV DGQKLTYVAS GTIESGDPAK GLPERLGALY AGVKEVLETY 
RPEQAAIEEV FLNVNPRSTL MLGQARGAVI AALVSEKLPV AEYSALRVKQ AIVGTGRAAK
PQVQEMVKRL LRLSRAPGTD ASDALGVAIC AAHHSQIPKA ITSALASKKR SK