Gene Rcas_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0719 
SymbolruvC 
ID5538184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp942770 
End bp943276 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID640892874 
ProductHolliday junction resolvase 
Protein accessionYP_001430858 
Protein GI156740729 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGCCT CGCGCACAAT TGGTATCGAC CCTGGCACTG CCCGAATGGG GTGGGGCATT 
GTCGAAGAAA CCGGCGGAAC GGTGTCTCTG GTTGATTGTG GTGTGCTGAC GACGCCTGCG
GGAGTATCGC AGGCGTCACG CTTGCTGCAA CTGTACAACG ACTTGTGCAG TCTGATTGCG
CGCTACCATC CTGCCGCCGC CGCGATTGAA GAACTGTTTT TCGGCAAGAA TGTCAATACG
GCGTTGAACG TCGGGCAGGC GCGCGGTATT GCGCTGCTGG CGTTTGCACA GGCTGGTATT
CCTGTCCACG AATATAAGCC GTTGCAGGTC AAGCAGGCGC TGGCAGGGTA TGGCGGCGCT
GATAAGCGCC AGGTGCAGGA GATGGTTCGT CTGACGCTTC GCTTGCCGAC TATCCCGCGC
CCCGATGATG CCGCTGATGC TGTGGCAGTG GCGATCTGCC ATACCTATGC CGCGCCGATG
CTGCGCCGGA TCGGGGAAGG GCGGTAG
 
Protein sequence
MIASRTIGID PGTARMGWGI VEETGGTVSL VDCGVLTTPA GVSQASRLLQ LYNDLCSLIA 
RYHPAAAAIE ELFFGKNVNT ALNVGQARGI ALLAFAQAGI PVHEYKPLQV KQALAGYGGA
DKRQVQEMVR LTLRLPTIPR PDDAADAVAV AICHTYAAPM LRRIGEGR