Gene Shew185_2305 details

Gene Information

• Locus tag: Shew185_2305
• Symbol: ruvC
• ID: 5370525
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 2749507
• End bp: 2750028
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640830519
• Product: Holliday junction resolvase
• Protein accession: YP_001366506
• Protein GI: 153000825
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00234267
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATTA TTTTAGGTGT TGACCCAGGT TCACGGATCA CAGGCTACGG CGTGATCCAA 
TGTCAGGGAC GGCATCAGAT TTACCTCGGC AGTGGCTGTA TTCGCACTTC GTCTGAAGAG 
CTTCCTGGTA GGCTCAAGCA AATTTTTGAT GGGATCACTG AAATTATTCG TCAGTATCAA 
CCGGACGAAT TTGCAATTGA ACGGGTATTT ATGGCAAAAA ATGCCGATTC TGCGCTCAAG 
CTTGGTCAAG CACGCGGCGC GGCCATTGTC GCCGCCACGG TCGCCAATTT ACCTGTGGCT 
GAATATAGTG CGACTCAAAT TAAAAGCGCA GTCGTTGGCA CGGGGCGAGC ACAGAAAGCT 
CAAGTACAAC ACATGATCCA ACAACTACTT AAATTACCCG CAGCCCCACA AGCTGACGCC 
GCAGATGCAC TCGGAGTTGC TGTGTGTCAT TATCACACTA GCCAGAGTTT AATCGCATTG 
AGTGGCCGGG CAACGGCAAG AACATACGGA CGGTACAGAT GA 

 

Protein sequence

MAIILGVDPG SRITGYGVIQ CQGRHQIYLG SGCIRTSSEE LPGRLKQIFD GITEIIRQYQ 
PDEFAIERVF MAKNADSALK LGQARGAAIV AATVANLPVA EYSATQIKSA VVGTGRAQKA 
QVQHMIQQLL KLPAAPQADA ADALGVAVCH YHTSQSLIAL SGRATARTYG RYR