Gene Pmen_1270 details

Gene Information

• Locus tag: Pmen_1270
• Symbol: ruvC
• ID: 5109086
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 1431808
• End bp: 1432332
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640502495
• Product: Holliday junction resolvase
• Protein accession: YP_001186767
• Protein GI: 146306302
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.460583
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 0.748169
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCTGA TTCTAGGCAT CGATCCCGGC TCGCGCATTA CCGGCTATGG CGTGGTGCGC 
GATACCGGGC GTGGCTGCGA GTACGTCGCC TCGGGCTGCA TTCGCACCGG CGACGGTCCC 
TTGGCCGAGC GTCTGCAGAT CGTCTTTCGC GGCGTCAGCG AGGTGATTCG CACCCATGGG 
CCGGTGACCA TGGGCATCGA GCAGGTGTTC ATGGCGCGCA ATGCCGACTC GGCCCTCAAG 
CTGGGGCAGG CGAGGGGCGC GGCCATCGTC GCGGCGGTGG AGGCGGGGCT GGAGATCAGC 
GAATACACCG CCACACAGGT CAAGCAGGCC GTGGTCGGCA CCGGTGCAGC GGACAAGCAG 
CAGGTACAGA TGATGGTCAT GCACCTGCTC AAGCTGGTGC AAAAACCGCA GATCGACGCC 
TCCGATGCCC TGGGTATCGC CCTGTGCCAT GCCCATCACC GGCAGAGCCT GATTCCCCAT 
GGGCTGGCCA GTGCCAAGCG GCGTGGCGGT CGTCTTCGTT TATAA 

 

Protein sequence

MTLILGIDPG SRITGYGVVR DTGRGCEYVA SGCIRTGDGP LAERLQIVFR GVSEVIRTHG 
PVTMGIEQVF MARNADSALK LGQARGAAIV AAVEAGLEIS EYTATQVKQA VVGTGAADKQ 
QVQMMVMHLL KLVQKPQIDA SDALGIALCH AHHRQSLIPH GLASAKRRGG RLRL