| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1798 |
|---|
| Symbol | |
|---|
| ID | 6315261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1863089 |
|---|
| End bp | 1863574 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642644172 |
|---|
| Product | Holliday junction endonuclease RuvC |
|---|
| Protein accession | YP_001917958 |
|---|
| Protein GI | 188586413 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
|---|
| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.000582609 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTATAA TGGGGTTAGA TCCTGGAATA GCAGCATGTG GGTATGGTAT AATACATGCT
AAAGGTACTA AATTAGAATG TCTTGCATGC GGTGTTTTAC GTACATATAG TGACGAAAGT
GCTACAAAGC GCCTGGAATC AATTTATCAA GGAGTTTCAA ACTTGATAAG TGAATTTTCA
CCGAATACTG TAGCTGTAGA AAGTTTATTT TTTGCCAAGA ACTCTAAGAC AGCGATGAAG
GTGGGACAAG CCAAAGGGGT ACTAATGCTT GCAGCAGCTC ATAACAATTT AGAAATCTTT
GAGTATACTC CTTTACAAGT TAAACAGGGA GTTTGCGGTT ATGGTTCGGC TTCTAAGGAA
CAAGTGCAAA AAATGGTTAA ACAGATTCTA AGTTTAGATA AGATTCCTAA GCCTGATGAT
GCCGCAGATG CCCTGGCTGT GTCATTGTGC CATTCCCAGG CATACCGCTT GAGAACTAGA
TTATAA
|
|---|
| Protein sequence | MIIMGLDPGI AACGYGIIHA KGTKLECLAC GVLRTYSDES ATKRLESIYQ GVSNLISEFS
PNTVAVESLF FAKNSKTAMK VGQAKGVLML AAAHNNLEIF EYTPLQVKQG VCGYGSASKE
QVQKMVKQIL SLDKIPKPDD AADALAVSLC HSQAYRLRTR L
|
|---|
| |