More than 300 homologs were found in PanDaTox collection
for query gene Mboo_0111 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_0111  Holliday junction resolvase  100 
 
 
156 aa  316  7.999999999999999e-86  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0890  Holliday junction resolvase  58.33 
 
 
164 aa  185  2e-46  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.0795494 
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  50.98 
 
 
182 aa  167  3e-41  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  52.32 
 
 
167 aa  162  2.0000000000000002e-39  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  46.79 
 
 
162 aa  162  2.0000000000000002e-39  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  50.98 
 
 
165 aa  161  3e-39  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  50.99 
 
 
163 aa  158  3e-38  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  48.34 
 
 
164 aa  157  5e-38  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  47.68 
 
 
166 aa  156  9e-38  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  44.37 
 
 
164 aa  154  4e-37  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3179  crossover junction endodeoxyribonuclease RuvC  51.63 
 
 
164 aa  152  1e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal 
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  46.36 
 
 
165 aa  152  1e-36  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  51.32 
 
 
160 aa  151  4e-36  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  47.06 
 
 
159 aa  149  2e-35  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_010424  Daud_1364  crossover junction endodeoxyribonuclease RuvC  50.64 
 
 
162 aa  148  3e-35  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.553646  n/a   
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  43.59 
 
 
161 aa  148  3e-35  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  48.39 
 
 
179 aa  147  8e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_008346  Swol_1433  hypothetical protein  49.36 
 
 
172 aa  140  5e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.000000864662  n/a   
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  46.41 
 
 
164 aa  140  6e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  46.41 
 
 
164 aa  140  7e-33  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_013205  Aaci_2115  crossover junction endodeoxyribonuclease RuvC  53.46 
 
 
184 aa  137  4.999999999999999e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.805464  n/a   
 
 
-
 
NC_009767  Rcas_0719  Holliday junction resolvase  51.66 
 
 
168 aa  137  6e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  43.87 
 
 
173 aa  136  1e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  49.01 
 
 
171 aa  136  1e-31  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_009972  Haur_4753  Holliday junction resolvase  48.34 
 
 
165 aa  131  3e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1864  crossover junction endodeoxyribonuclease RuvC  48.03 
 
 
178 aa  130  5e-30  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.000897484  n/a   
 
 
-
 
NC_011661  Dtur_1614  Holliday junction resolvase  39.61 
 
 
158 aa  130  5e-30  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_11451  Holliday junction resolvase  41.18 
 
 
157 aa  130  6e-30  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.447359  n/a   
 
 
-
 
NC_010003  Pmob_1484  Holliday junction resolvase  48.72 
 
 
163 aa  130  7.999999999999999e-30  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2595  Holliday junction resolvase  50.98 
 
 
164 aa  129  1.0000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00143043 
 
 
-
 
NC_009523  RoseRS_4363  Holliday junction resolvase  50 
 
 
168 aa  128  3e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.140829 
 
 
-
 
NC_007492  Pfl01_4409  Holliday junction resolvase  42.48 
 
 
175 aa  127  6e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.049138  normal 
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  45.03 
 
 
164 aa  127  7.000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_013172  Bfae_13940  Holliday junction endonuclease RuvC  49.62 
 
 
197 aa  126  9.000000000000001e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  0.191488  n/a   
 
 
-
 
NC_009718  Fnod_1720  crossover junction endodeoxyribonuclease RuvC  44.67 
 
 
166 aa  126  1.0000000000000001e-28  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.029168  n/a   
 
 
-
 
NC_009976  P9211_11371  Holliday junction resolvase  41.03 
 
 
158 aa  126  1.0000000000000001e-28  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal  0.925664 
 
 
-
 
NC_007577  PMT9312_1065  Holliday junction resolvase  39.22 
 
 
157 aa  125  2.0000000000000002e-28  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1217  crossover junction endodeoxyribonuclease RuvC  44.87 
 
 
164 aa  125  2.0000000000000002e-28  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.331391  n/a   
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  44.44 
 
 
176 aa  125  2.0000000000000002e-28  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_009091  P9301_11601  Holliday junction resolvase  39.87 
 
 
157 aa  125  3e-28  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  43.42 
 
 
173 aa  124  3e-28  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_013515  Smon_0984  crossover junction endodeoxyribonuclease RuvC  44.87 
 
 
200 aa  125  3e-28  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_1794  crossover junction endodeoxyribonuclease RuvC  47.71 
 
 
188 aa  124  4.0000000000000003e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.282589  normal  0.0953637 
 
 
-
 
NC_009455  DehaBAV1_0420  crossover junction endodeoxyribonuclease RuvC  43.59 
 
 
167 aa  124  5e-28  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  43.79 
 
 
161 aa  124  5e-28  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  41.94 
 
 
173 aa  124  7e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_51800  Holliday junction resolvase  42.58 
 
 
174 aa  124  7e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000486306 
 
 
-
 
NC_002936  DET0443  crossover junction endodeoxyribonuclease RuvC  44.37 
 
 
165 aa  123  1e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  41.94 
 
 
173 aa  122  1e-27  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_007005  Psyr_1408  Holliday junction resolvase  42.11 
 
 
174 aa  123  1e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0741674  normal 
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  44.37 
 
 
164 aa  123  1e-27  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_009656  PSPA7_4543  Holliday junction resolvase  41.94 
 
 
174 aa  122  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_385  crossover junction endodeoxyribonuclease  44.37 
 
 
165 aa  122  2e-27  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3979  crossover junction endodeoxyribonuclease RuvC  41.83 
 
 
176 aa  122  2e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.175883  n/a   
 
 
-
 
NC_009616  Tmel_1038  Holliday junction resolvase  45.33 
 
 
157 aa  122  2e-27  Thermosipho melanesiensis BI429  Bacteria  normal  0.0318292  n/a   
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  41.94 
 
 
173 aa  122  2e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_007514  Cag_0164  crossover junction endodeoxyribonuclease RuvC  40.79 
 
 
192 aa  122  2e-27  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_11591  Holliday junction resolvase  39.22 
 
 
157 aa  122  2e-27  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1270  Holliday junction resolvase  42.76 
 
 
174 aa  122  2e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.460583  normal  0.748169 
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  41.29 
 
 
173 aa  121  3e-27  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_013203  Apar_0895  crossover junction endodeoxyribonuclease RuvC  40.38 
 
 
167 aa  121  3e-27  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000302066  normal  0.153116 
 
 
-
 
NC_013730  Slin_2240  crossover junction endodeoxyribonuclease RuvC  39.33 
 
 
182 aa  121  3e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0658  crossover junction endodeoxyribonuclease RuvC  42.76 
 
 
191 aa  121  4e-27  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.545827  n/a   
 
 
-
 
NC_013522  Taci_0924  crossover junction endodeoxyribonuclease RuvC  43.51 
 
 
165 aa  121  4e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.250191  n/a   
 
 
-
 
NC_013525  Tter_0957  crossover junction endodeoxyribonuclease RuvC  45.45 
 
 
171 aa  121  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_2095  Holliday junction resolvase  45.1 
 
 
182 aa  121  5e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0696  crossover junction endodeoxyribonuclease RuvC  43.59 
 
 
164 aa  120  5e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.381333  normal  0.521985 
 
 
-
 
NC_013132  Cpin_1243  crossover junction endodeoxyribonuclease RuvC  39.74 
 
 
202 aa  120  6e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2385  Holliday junction endonuclease RuvC  45.1 
 
 
177 aa  120  6e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1992  Holliday junction resolvase  47.68 
 
 
199 aa  120  8e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0125062 
 
 
-
 
NC_008726  Mvan_2573  Holliday junction resolvase  46.05 
 
 
194 aa  120  8e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_07030  crossover junction endodeoxyribonuclease RuvC  42 
 
 
165 aa  120  9e-27  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000194314  normal  0.296999 
 
 
-
 
NC_014150  Bmur_1651  crossover junction endodeoxyribonuclease RuvC  40.4 
 
 
157 aa  119  9.999999999999999e-27  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_1152  crossover junction endodeoxyribonuclease RuvC  38.16 
 
 
189 aa  119  9.999999999999999e-27  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_17510  Holliday junction endonuclease RuvC  45.1 
 
 
189 aa  119  1.9999999999999998e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.919514  normal  0.170304 
 
 
-
 
NC_013162  Coch_0079  Holliday junction resolvase  39.07 
 
 
181 aa  119  1.9999999999999998e-26  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  38.82 
 
 
173 aa  119  1.9999999999999998e-26  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_013595  Sros_6113  Crossover junction endodeoxyribonuclease  43.79 
 
 
200 aa  118  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0688405 
 
 
-
 
NC_013093  Amir_1692  crossover junction endodeoxyribonuclease RuvC  47.06 
 
 
330 aa  118  3e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3618  crossover junction endodeoxyribonuclease RuvC  40.26 
 
 
166 aa  118  3e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.1831  normal  0.457471 
 
 
-
 
NC_009486  Tpet_0343  Holliday junction resolvase  47.68 
 
 
165 aa  117  4.9999999999999996e-26  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2300  crossover junction endodeoxyribonuclease RuvC  44.74 
 
 
189 aa  117  4.9999999999999996e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3343  Holliday junction resolvase  43.14 
 
 
180 aa  117  4.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00888007 
 
 
-
 
NC_010483  TRQ2_0361  Holliday junction resolvase  47.68 
 
 
165 aa  117  4.9999999999999996e-26  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2042  Holliday junction resolvase  42.76 
 
 
173 aa  117  7e-26  Shewanella baltica OS223  Bacteria  hitchhiker  0.000214475  hitchhiker  0.0000000571856 
 
 
-
 
NC_009665  Shew185_2305  Holliday junction resolvase  42.76 
 
 
173 aa  117  7e-26  Shewanella baltica OS185  Bacteria  hitchhiker  0.00234267  n/a   
 
 
-
 
NC_009052  Sbal_2040  Holliday junction resolvase  42.76 
 
 
173 aa  117  7e-26  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000000885772  n/a   
 
 
-
 
NC_013131  Caci_2352  crossover junction endodeoxyribonuclease RuvC  43.79 
 
 
170 aa  117  7e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2421  Holliday junction resolvase  42.76 
 
 
173 aa  117  7e-26  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000504743  normal  0.0281023 
 
 
-
 
NC_008255  CHU_2183  Holliday junction resolvase  37.75 
 
 
200 aa  117  7.999999999999999e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.198911 
 
 
-
 
NC_007951  Bxe_A0617  Holliday junction resolvase  43.14 
 
 
180 aa  117  9e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.481352 
 
 
-
 
NC_009953  Sare_1798  Holliday junction resolvase  42.86 
 
 
175 aa  116  9.999999999999999e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.0451382  hitchhiker  0.00012152 
 
 
-
 
NC_013235  Namu_3396  crossover junction endodeoxyribonuclease RuvC  48.39 
 
 
181 aa  116  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00187802  hitchhiker  0.00000696704 
 
 
-
 
NC_013721  HMPREF0424_0838  crossover junction endodeoxyribonuclease RuvC  44.16 
 
 
193 aa  116  9.999999999999999e-26  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012560  Avin_36710  Holliday junction resolvase  43.42 
 
 
174 aa  115  1.9999999999999998e-25  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3828  crossover junction endodeoxyribonuclease RuvC  44.44 
 
 
176 aa  115  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0595683  normal 
 
 
-
 
NC_011886  Achl_2033  Holliday junction resolvase  44.08 
 
 
192 aa  115  1.9999999999999998e-25  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000000766099 
 
 
-
 
NC_009092  Shew_2077  Holliday junction resolvase  40.65 
 
 
173 aa  115  3e-25  Shewanella loihica PV-4  Bacteria  normal  0.414118  normal 
 
 
-
 
NC_014210  Ndas_0837  crossover junction endodeoxyribonuclease RuvC  43.71 
 
 
185 aa  114  3.9999999999999997e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0698715  normal  0.0994154 
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  42.38 
 
 
180 aa  114  3.9999999999999997e-25  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
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