Gene SeD_A1349 details

Gene Information

• Locus tag: SeD_A1349
• Symbol: ruvC
• ID: 6874020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 1324678
• End bp: 1325199
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642784517
• Product: Holliday junction resolvase
• Protein accession: YP_002215187
• Protein GI: 198245392
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 44
• Fosmid unclonability p-value: 0.00353939
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGTCGATTA TTCTCGGTAT TGACCCCGGC TCGCGCATTA CCGGTTATGG CGTTATCCGC 
CAGGTAGGCA GACAACTGAC CTATCTGGGC AGCGGATGTA TTCGTACCAA AGTCGATGAT 
TTGCCGTCTC GTTTGAAGCT CATATACGCA GGCGTGACGG AAATCATCAC GCAGTTCCAG 
CCGGACTATT TTGCTATCGA ACAGGTGTTT ATGGCGAAAA ATGCCGACTC AGCCCTCAAG 
CTGGGACAGG CGCGCGGCGT CGCGATTGTC GCCGCGGTCA ATCAGGAACT GCCTGTGTTT 
GAATACGCGG CACGTCAGGT GAAGCAAACT GTCGTCGGTA TTGGTAGCGC GGAAAAAAGC 
CAGGTACAGC ATATGGTGCG CACGTTGCTG AAGCTCCCCG CTAACCCGCA GGCAGACGCC 
GCAGATGCGC TGGCTATCGC CATTACGCAT TGCCATGTTA GCCAGAACGC GATGCAAATG 
AGCGAATCGC GGCTGAATTT AGCGCGTGGG AGAATGCGCT GA 

 

Protein sequence

MSIILGIDPG SRITGYGVIR QVGRQLTYLG SGCIRTKVDD LPSRLKLIYA GVTEIITQFQ 
PDYFAIEQVF MAKNADSALK LGQARGVAIV AAVNQELPVF EYAARQVKQT VVGIGSAEKS 
QVQHMVRTLL KLPANPQADA ADALAIAITH CHVSQNAMQM SESRLNLARG RMR