Gene Sfri_2182 details

Gene Information

• Locus tag: Sfri_2182
• Symbol: ruvC
• ID: 4279094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 2608403
• End bp: 2608924
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638134977
• Product: Holliday junction resolvase
• Protein accession: YP_750866
• Protein GI: 114563353
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.64085
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATTA TTTTAGGAGT CGATCCCGGC TCCCGCATTA CAGGCTATGG TGTGATCCAA 
TGCCAAGGCC GTCAACAGAT TTACCTTGGT AGTGGCTGTA TTCGAACCTC TGCTGATGAT 
TTACCACAAC GATTACAACA AATTTATGCA GGCTTATGCG AAATCATTAC CCAATATAAA 
CCAGATGAGT TTGCTATTGA GCGGGTATTT ATGGCTAAAA ATGCTGATTC AGCCTTAAAG 
CTTGGTCAAG CCAGAGGCGC GGCAATTGTT GCAGCTACTT GTGCTGGACT GCCCGTTGCG 
GAATATAGCG CAACTCAGAT TAAAAGTGCT GTAGTGGGCA CTGGCCGAGC TCAAAAAACG 
CAAGTTCAAC ATATGATTAA GCAATTACTT AAACTACCTG CTTCACCTCA AGCTGACGCG 
GCTGATGCAT TAGGGGTAGC AATATGCCAT TTTCATACTT ATCAAAGCCT TATCGCTATG 
GGCGGTAAAG CTAGCAGCAG AACATATGGA AGATACAAAT GA 

 

Protein sequence

MAIILGVDPG SRITGYGVIQ CQGRQQIYLG SGCIRTSADD LPQRLQQIYA GLCEIITQYK 
PDEFAIERVF MAKNADSALK LGQARGAAIV AATCAGLPVA EYSATQIKSA VVGTGRAQKT 
QVQHMIKQLL KLPASPQADA ADALGVAICH FHTYQSLIAM GGKASSRTYG RYK