Gene Sfri_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2182 
SymbolruvC 
ID4279094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2608403 
End bp2608924 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content44% 
IMG OID638134977 
ProductHolliday junction resolvase 
Protein accessionYP_750866 
Protein GI114563353 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.64085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTA TTTTAGGAGT CGATCCCGGC TCCCGCATTA CAGGCTATGG TGTGATCCAA 
TGCCAAGGCC GTCAACAGAT TTACCTTGGT AGTGGCTGTA TTCGAACCTC TGCTGATGAT
TTACCACAAC GATTACAACA AATTTATGCA GGCTTATGCG AAATCATTAC CCAATATAAA
CCAGATGAGT TTGCTATTGA GCGGGTATTT ATGGCTAAAA ATGCTGATTC AGCCTTAAAG
CTTGGTCAAG CCAGAGGCGC GGCAATTGTT GCAGCTACTT GTGCTGGACT GCCCGTTGCG
GAATATAGCG CAACTCAGAT TAAAAGTGCT GTAGTGGGCA CTGGCCGAGC TCAAAAAACG
CAAGTTCAAC ATATGATTAA GCAATTACTT AAACTACCTG CTTCACCTCA AGCTGACGCG
GCTGATGCAT TAGGGGTAGC AATATGCCAT TTTCATACTT ATCAAAGCCT TATCGCTATG
GGCGGTAAAG CTAGCAGCAG AACATATGGA AGATACAAAT GA
 
Protein sequence
MAIILGVDPG SRITGYGVIQ CQGRQQIYLG SGCIRTSADD LPQRLQQIYA GLCEIITQYK 
PDEFAIERVF MAKNADSALK LGQARGAAIV AATCAGLPVA EYSATQIKSA VVGTGRAQKT
QVQHMIKQLL KLPASPQADA ADALGVAICH FHTYQSLIAM GGKASSRTYG RYK