More than 300 homologs were found in PanDaTox collection
for query gene Fjoh_1377 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_1377  Holliday junction resolvase  100 
 
 
184 aa  379  1e-104  Flavobacterium johnsoniae UW101  Bacteria  normal  0.180632  n/a   
 
 
-
 
NC_014230  CA2559_04920  Holliday junction resolvase  82.61 
 
 
184 aa  317  7.999999999999999e-86  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0079  Holliday junction resolvase  81.01 
 
 
181 aa  304  4.0000000000000004e-82  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0400  crossover junction endodeoxyribonuclease RuvC  57.69 
 
 
187 aa  223  1e-57  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.253093 
 
 
-
 
NC_008255  CHU_2183  Holliday junction resolvase  58.79 
 
 
200 aa  223  1e-57  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.198911 
 
 
-
 
NC_002950  PG1324  Holliday junction resolvase  57.22 
 
 
189 aa  219  9.999999999999999e-57  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_1243  crossover junction endodeoxyribonuclease RuvC  54.4 
 
 
202 aa  213  9.999999999999999e-55  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_0769  Holliday junction resolvase  55.25 
 
 
182 aa  202  3e-51  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_2240  crossover junction endodeoxyribonuclease RuvC  54.14 
 
 
182 aa  194  5.000000000000001e-49  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2024  crossover junction endodeoxyribonuclease RuvC  51.72 
 
 
174 aa  174  5e-43  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.270217  normal 
 
 
-
 
NC_013501  Rmar_2400  crossover junction endodeoxyribonuclease RuvC  43.72 
 
 
191 aa  157  6e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  0.553379  n/a   
 
 
-
 
NC_007512  Plut_1642  crossover junction endodeoxyribonuclease RuvC  40.22 
 
 
191 aa  140  8e-33  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0420  crossover junction endodeoxyribonuclease RuvC  42.95 
 
 
167 aa  129  2.0000000000000002e-29  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  37.42 
 
 
179 aa  125  2.0000000000000002e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  38.96 
 
 
164 aa  125  3e-28  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_013552  DhcVS_385  crossover junction endodeoxyribonuclease  41.61 
 
 
165 aa  125  4.0000000000000003e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  40.27 
 
 
164 aa  125  5e-28  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  41.83 
 
 
171 aa  124  6e-28  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  41.33 
 
 
167 aa  124  6e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  40.96 
 
 
173 aa  124  7e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_002936  DET0443  crossover junction endodeoxyribonuclease RuvC  40.94 
 
 
165 aa  124  1e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0658  crossover junction endodeoxyribonuclease RuvC  34.24 
 
 
191 aa  123  1e-27  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.545827  n/a   
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  41.61 
 
 
164 aa  122  2e-27  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  39.33 
 
 
163 aa  122  4e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  40.88 
 
 
173 aa  120  9e-27  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  36.91 
 
 
182 aa  119  3e-26  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  38 
 
 
161 aa  119  3e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_010803  Clim_0476  crossover junction endodeoxyribonuclease RuvC  32.28 
 
 
190 aa  117  7e-26  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0164  crossover junction endodeoxyribonuclease RuvC  33.68 
 
 
192 aa  117  7.999999999999999e-26  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4543  Holliday junction resolvase  37.33 
 
 
174 aa  117  7.999999999999999e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  38.16 
 
 
176 aa  117  7.999999999999999e-26  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_008463  PA14_51800  Holliday junction resolvase  37.33 
 
 
174 aa  117  9e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000486306 
 
 
-
 
NC_007912  Sde_2535  Holliday junction resolvase  38.97 
 
 
173 aa  116  9.999999999999999e-26  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.278528 
 
 
-
 
NC_009831  Ssed_2032  Holliday junction resolvase  40.25 
 
 
173 aa  117  9.999999999999999e-26  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00302461  normal 
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  38.99 
 
 
173 aa  115  3e-25  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  36 
 
 
165 aa  115  3.9999999999999997e-25  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  36.67 
 
 
165 aa  114  6.9999999999999995e-25  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_010831  Cphamn1_0543  crossover junction endodeoxyribonuclease RuvC  32.43 
 
 
186 aa  114  7.999999999999999e-25  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1221  crossover junction endodeoxyribonuclease RuvC  38.16 
 
 
165 aa  113  1.0000000000000001e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  0.69785  n/a   
 
 
-
 
NC_011883  Ddes_0740  Holliday junction resolvase  36.42 
 
 
173 aa  114  1.0000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.100777  n/a   
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  37.33 
 
 
180 aa  114  1.0000000000000001e-24  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  38 
 
 
166 aa  113  2.0000000000000002e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_008751  Dvul_0987  Holliday junction resolvase  35.26 
 
 
166 aa  113  2.0000000000000002e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.221378 
 
 
-
 
NC_004347  SO_2431  Holliday junction resolvase  40.25 
 
 
173 aa  112  3e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013173  Dbac_3491  Holliday junction resolvase  37.11 
 
 
173 aa  112  3e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2354  Holliday junction resolvase  38.31 
 
 
180 aa  112  3e-24  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.542113 
 
 
-
 
NC_008577  Shewana3_1955  Holliday junction resolvase  39.62 
 
 
173 aa  112  3e-24  Shewanella sp. ANA-3  Bacteria  normal  0.0326541  normal  0.873797 
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  38.93 
 
 
161 aa  112  4.0000000000000004e-24  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_008554  Sfum_0995  crossover junction endodeoxyribonuclease RuvC  36.59 
 
 
183 aa  112  4.0000000000000004e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.410626  normal 
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  36.77 
 
 
164 aa  111  6e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_011059  Paes_0497  crossover junction endodeoxyribonuclease RuvC  30.27 
 
 
187 aa  111  6e-24  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.655461  normal 
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  37.33 
 
 
162 aa  111  7.000000000000001e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  36.77 
 
 
164 aa  111  7.000000000000001e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2077  Holliday junction resolvase  38.36 
 
 
173 aa  110  9e-24  Shewanella loihica PV-4  Bacteria  normal  0.414118  normal 
 
 
-
 
NC_009438  Sputcn32_1937  Holliday junction resolvase  38.99 
 
 
173 aa  110  1.0000000000000001e-23  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00155576  n/a   
 
 
-
 
NC_007005  Psyr_1408  Holliday junction resolvase  35.44 
 
 
174 aa  110  1.0000000000000001e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0741674  normal 
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  38.92 
 
 
173 aa  110  1.0000000000000001e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1900  Holliday junction resolvase  39.62 
 
 
173 aa  110  1.0000000000000001e-23  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000300533  hitchhiker  0.000114763 
 
 
-
 
NC_008322  Shewmr7_2078  Holliday junction resolvase  39.62 
 
 
173 aa  110  1.0000000000000001e-23  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000308371  hitchhiker  0.00162508 
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  38.92 
 
 
173 aa  110  1.0000000000000001e-23  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_013216  Dtox_1109  Holliday junction resolvase  35.33 
 
 
159 aa  110  1.0000000000000001e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000183978  normal 
 
 
-
 
NC_004578  PSPTO_3979  crossover junction endodeoxyribonuclease RuvC  34.59 
 
 
176 aa  109  2.0000000000000002e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.175883  n/a   
 
 
-
 
NC_009712  Mboo_0111  Holliday junction resolvase  36.42 
 
 
156 aa  109  2.0000000000000002e-23  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009439  Pmen_1270  Holliday junction resolvase  35.44 
 
 
174 aa  109  2.0000000000000002e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.460583  normal  0.748169 
 
 
-
 
NC_011663  Sbal223_2042  Holliday junction resolvase  39.62 
 
 
173 aa  109  2.0000000000000002e-23  Shewanella baltica OS223  Bacteria  hitchhiker  0.000214475  hitchhiker  0.0000000571856 
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  38.36 
 
 
173 aa  109  2.0000000000000002e-23  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_009052  Sbal_2040  Holliday junction resolvase  39.62 
 
 
173 aa  109  2.0000000000000002e-23  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000000885772  n/a   
 
 
-
 
NC_009665  Shew185_2305  Holliday junction resolvase  39.62 
 
 
173 aa  109  2.0000000000000002e-23  Shewanella baltica OS185  Bacteria  hitchhiker  0.00234267  n/a   
 
 
-
 
NC_008639  Cpha266_0539  crossover junction endodeoxyribonuclease RuvC  31.46 
 
 
187 aa  109  2.0000000000000002e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2421  Holliday junction resolvase  39.62 
 
 
173 aa  109  2.0000000000000002e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000504743  normal  0.0281023 
 
 
-
 
NC_013739  Cwoe_3179  crossover junction endodeoxyribonuclease RuvC  36.67 
 
 
164 aa  108  3e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.844491  normal 
 
 
-
 
NC_007651  BTH_I1249  Holliday junction resolvase  38.93 
 
 
180 aa  108  4.0000000000000004e-23  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1846  crossover junction endodeoxyribonuclease RuvC  41.91 
 
 
186 aa  108  4.0000000000000004e-23  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.018832  n/a   
 
 
-
 
NC_013223  Dret_1747  Holliday junction resolvase  37.09 
 
 
170 aa  108  6e-23  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.607448  normal  0.595925 
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  34.18 
 
 
164 aa  107  7.000000000000001e-23  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3618  crossover junction endodeoxyribonuclease RuvC  36.13 
 
 
166 aa  107  1e-22  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.1831  normal  0.457471 
 
 
-
 
NC_011901  Tgr7_2236  Crossover junction endodeoxyribonuclease  41.22 
 
 
179 aa  107  1e-22  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3364  Holliday junction resolvase  38.93 
 
 
180 aa  107  1e-22  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_3202  Holliday junction resolvase  38.1 
 
 
197 aa  107  1e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0673445 
 
 
-
 
NC_010506  Swoo_2573  Holliday junction resolvase  37.74 
 
 
173 aa  106  2e-22  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00104649  hitchhiker  0.00130455 
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  37.11 
 
 
173 aa  106  2e-22  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_007492  Pfl01_4409  Holliday junction resolvase  36 
 
 
175 aa  106  2e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.049138  normal 
 
 
-
 
NC_010681  Bphyt_3343  Holliday junction resolvase  38.26 
 
 
180 aa  106  2e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.00888007 
 
 
-
 
NC_010622  Bphy_2554  Holliday junction resolvase  38.93 
 
 
180 aa  106  2e-22  Burkholderia phymatum STM815  Bacteria  normal  0.250708  normal 
 
 
-
 
NC_010551  BamMC406_0609  Holliday junction resolvase  37.58 
 
 
183 aa  105  3e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.385188  normal  0.439523 
 
 
-
 
NC_006348  BMA2355  Holliday junction resolvase  38.26 
 
 
180 aa  105  3e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1250  Holliday junction resolvase  40.44 
 
 
174 aa  105  3e-22  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009076  BURPS1106A_3399  Holliday junction resolvase  38.26 
 
 
180 aa  105  3e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3405  Holliday junction resolvase  38.26 
 
 
180 aa  105  3e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2534  Holliday junction resolvase  38.26 
 
 
180 aa  105  3e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0509  Holliday junction resolvase  38.97 
 
 
189 aa  105  3e-22  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0583  Holliday junction resolvase  33.15 
 
 
183 aa  105  3e-22  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0617  Holliday junction resolvase  38.26 
 
 
180 aa  105  4e-22  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.481352 
 
 
-
 
NC_009436  Ent638_2431  Holliday junction resolvase  38.24 
 
 
173 aa  105  4e-22  Enterobacter sp. 638  Bacteria  normal  0.0114674  normal 
 
 
-
 
NC_008836  BMA10229_A1130  Holliday junction resolvase  38.26 
 
 
275 aa  105  4e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0268  Holliday junction resolvase  38.26 
 
 
284 aa  105  4e-22  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2694  Holliday junction resolvase  38.26 
 
 
180 aa  104  6e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.218252  normal  0.976349 
 
 
-
 
NC_010424  Daud_1364  crossover junction endodeoxyribonuclease RuvC  35.95 
 
 
162 aa  104  7e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.553646  n/a   
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  31.13 
 
 
160 aa  104  8e-22  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_013521  Sked_17510  Holliday junction endonuclease RuvC  33.54 
 
 
189 aa  103  9e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.919514  normal  0.170304 
 
 
-
 
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