Gene Tmel_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1038 
SymbolruvC 
ID5297112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1065085 
End bp1065558 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content36% 
IMG OID640769322 
ProductHolliday junction resolvase 
Protein accessionYP_001306284 
Protein GI150020930 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0318292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATAA TAGGTATTGA TCCAGGTTAT GGTATACTAG GATATGGCGT TTTGGAAAAG 
AGTGGAAATA AAATTTCACA CATTACTCAT GGTGTAATTA CCACTGATAA AGAACTTTCC
ATGTATAAAA GGCTTCAGGT GATTTACGAG GAATTTTTAA GACTTTTAAA GGAGTATTCT
CCCGATGCAT GTGCTATTGA AAGCCTATTT TTTTACAAAA ACGTCAAAAC GGCTATTCGT
GTTGGAGAAG CAAGAGGTGT AATTTTGCTT GCAACCTCAC AGATGGATCT TCCACTGTAT
GAATTTACAC CTTATCAAGT AAAGAACAAT ATAACCGGTT ATGGACATTC TGATAAAAAG
CAAGTTCAAA AGATGGTGAA AATGCTTTTG AATTTAGATA AAATTCCAAG ACCTGATGAT
GCAGCAGATG CTTTAGCTGT TGCATGGTGC CTGGCAGTGG AAACTAGATT TTAG
 
Protein sequence
MKIIGIDPGY GILGYGVLEK SGNKISHITH GVITTDKELS MYKRLQVIYE EFLRLLKEYS 
PDACAIESLF FYKNVKTAIR VGEARGVILL ATSQMDLPLY EFTPYQVKNN ITGYGHSDKK
QVQKMVKMLL NLDKIPRPDD AADALAVAWC LAVETRF