Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1038 |
Symbol | ruvC |
ID | 5297112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1065085 |
End bp | 1065558 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640769322 |
Product | Holliday junction resolvase |
Protein accession | YP_001306284 |
Protein GI | 150020930 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0318292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGATAA TAGGTATTGA TCCAGGTTAT GGTATACTAG GATATGGCGT TTTGGAAAAG AGTGGAAATA AAATTTCACA CATTACTCAT GGTGTAATTA CCACTGATAA AGAACTTTCC ATGTATAAAA GGCTTCAGGT GATTTACGAG GAATTTTTAA GACTTTTAAA GGAGTATTCT CCCGATGCAT GTGCTATTGA AAGCCTATTT TTTTACAAAA ACGTCAAAAC GGCTATTCGT GTTGGAGAAG CAAGAGGTGT AATTTTGCTT GCAACCTCAC AGATGGATCT TCCACTGTAT GAATTTACAC CTTATCAAGT AAAGAACAAT ATAACCGGTT ATGGACATTC TGATAAAAAG CAAGTTCAAA AGATGGTGAA AATGCTTTTG AATTTAGATA AAATTCCAAG ACCTGATGAT GCAGCAGATG CTTTAGCTGT TGCATGGTGC CTGGCAGTGG AAACTAGATT TTAG
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Protein sequence | MKIIGIDPGY GILGYGVLEK SGNKISHITH GVITTDKELS MYKRLQVIYE EFLRLLKEYS PDACAIESLF FYKNVKTAIR VGEARGVILL ATSQMDLPLY EFTPYQVKNN ITGYGHSDKK QVQKMVKMLL NLDKIPRPDD AADALAVAWC LAVETRF
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