More than 300 homologs were found in PanDaTox collection
for query gene Phep_0400 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_0400  crossover junction endodeoxyribonuclease RuvC  100 
 
 
187 aa  383  1e-106  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.253093 
 
 
-
 
NC_013162  Coch_0079  Holliday junction resolvase  59.44 
 
 
181 aa  229  2e-59  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2183  Holliday junction resolvase  56.35 
 
 
200 aa  223  9e-58  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.198911 
 
 
-
 
NC_009441  Fjoh_1377  Holliday junction resolvase  57.69 
 
 
184 aa  223  1e-57  Flavobacterium johnsoniae UW101  Bacteria  normal  0.180632  n/a   
 
 
-
 
NC_014230  CA2559_04920  Holliday junction resolvase  56.91 
 
 
184 aa  221  6e-57  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1324  Holliday junction resolvase  53.68 
 
 
189 aa  216  2e-55  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_1243  crossover junction endodeoxyribonuclease RuvC  52.15 
 
 
202 aa  215  2e-55  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010830  Aasi_0769  Holliday junction resolvase  55.49 
 
 
182 aa  212  2.9999999999999995e-54  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_2240  crossover junction endodeoxyribonuclease RuvC  52.49 
 
 
182 aa  203  1e-51  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2024  crossover junction endodeoxyribonuclease RuvC  56.34 
 
 
174 aa  182  2.0000000000000003e-45  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.270217  normal 
 
 
-
 
NC_013501  Rmar_2400  crossover junction endodeoxyribonuclease RuvC  42.54 
 
 
191 aa  160  1e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  0.553379  n/a   
 
 
-
 
NC_011060  Ppha_0658  crossover junction endodeoxyribonuclease RuvC  36.31 
 
 
191 aa  140  1.9999999999999998e-32  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.545827  n/a   
 
 
-
 
NC_002939  GSU1075  Holliday junction resolvase  42.67 
 
 
164 aa  135  5e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.228203  n/a   
 
 
-
 
NC_010718  Nther_1798  Holliday junction endonuclease RuvC  39.74 
 
 
161 aa  134  7.000000000000001e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000582609 
 
 
-
 
NC_007517  Gmet_0744  Holliday junction resolvase  42.67 
 
 
164 aa  134  8e-31  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000123972  normal 
 
 
-
 
NC_011059  Paes_0497  crossover junction endodeoxyribonuclease RuvC  35.91 
 
 
187 aa  131  3.9999999999999996e-30  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.655461  normal 
 
 
-
 
NC_009483  Gura_1415  Holliday junction resolvase  42 
 
 
171 aa  130  7.999999999999999e-30  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000523238  n/a   
 
 
-
 
NC_008148  Rxyl_1322  crossover junction endodeoxyribonuclease RuvC  36.69 
 
 
179 aa  129  2.0000000000000002e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0725718  n/a   
 
 
-
 
NC_007512  Plut_1642  crossover junction endodeoxyribonuclease RuvC  35.39 
 
 
191 aa  129  3e-29  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1660  crossover junction endodeoxyribonuclease RuvC  40.4 
 
 
163 aa  128  4.0000000000000003e-29  Desulfotomaculum reducens MI-1  Bacteria  normal  0.183319  n/a   
 
 
-
 
NC_010803  Clim_0476  crossover junction endodeoxyribonuclease RuvC  36.36 
 
 
190 aa  128  6e-29  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1452  Holliday junction resolvase  39.33 
 
 
182 aa  127  1.0000000000000001e-28  Thermoanaerobacter sp. X514  Bacteria  normal  0.883917  n/a   
 
 
-
 
NC_009783  VIBHAR_01598  Holliday junction resolvase  40.4 
 
 
173 aa  126  2.0000000000000002e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I1887  Holliday junction resolvase  41.06 
 
 
173 aa  126  2.0000000000000002e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.903201  n/a   
 
 
-
 
NC_008609  Ppro_2672  Holliday junction resolvase  38.73 
 
 
176 aa  126  2.0000000000000002e-28  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00163378  n/a   
 
 
-
 
NC_008709  Ping_0716  crossover junction endodeoxyribonuclease RuvC  43.05 
 
 
173 aa  125  3e-28  Psychromonas ingrahamii 37  Bacteria  normal  0.075927  normal  0.655045 
 
 
-
 
NC_013171  Apre_0903  crossover junction endodeoxyribonuclease RuvC  39.87 
 
 
164 aa  124  6e-28  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1438  Holliday junction resolvase  41.06 
 
 
173 aa  124  9e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000000786785  n/a   
 
 
-
 
NC_007514  Cag_0164  crossover junction endodeoxyribonuclease RuvC  33.16 
 
 
192 aa  122  2e-27  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003924  crossover junction endodeoxyribonuclease RuvC  39.74 
 
 
173 aa  123  2e-27  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00124897  n/a   
 
 
-
 
NC_011883  Ddes_0740  Holliday junction resolvase  41.33 
 
 
173 aa  122  3e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.100777  n/a   
 
 
-
 
NC_012918  GM21_0932  Holliday junction resolvase  39.07 
 
 
164 aa  122  3e-27  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000174044 
 
 
-
 
NC_011146  Gbem_3314  Holliday junction resolvase  39.07 
 
 
164 aa  122  3e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1702  crossover junction endodeoxyribonuclease RuvC  38.41 
 
 
167 aa  121  6e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.131729  normal  0.717874 
 
 
-
 
NC_008309  HS_0509  Holliday junction resolvase  41.18 
 
 
189 aa  121  6e-27  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0539  crossover junction endodeoxyribonuclease RuvC  34.64 
 
 
187 aa  121  7e-27  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2182  Holliday junction resolvase  37.57 
 
 
173 aa  120  9.999999999999999e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.64085  n/a   
 
 
-
 
NC_002977  MCA1221  crossover junction endodeoxyribonuclease RuvC  41.18 
 
 
165 aa  120  1.9999999999999998e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  0.69785  n/a   
 
 
-
 
NC_010831  Cphamn1_0543  crossover junction endodeoxyribonuclease RuvC  34.62 
 
 
186 aa  119  3e-26  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1038  Holliday junction resolvase  39.55 
 
 
157 aa  116  1.9999999999999998e-25  Thermosipho melanesiensis BI429  Bacteria  normal  0.0318292  n/a   
 
 
-
 
NC_013385  Adeg_1632  crossover junction endodeoxyribonuclease RuvC  34.19 
 
 
160 aa  116  1.9999999999999998e-25  Ammonifex degensii KC4  Bacteria  normal  0.286173  n/a   
 
 
-
 
NC_009455  DehaBAV1_0420  crossover junction endodeoxyribonuclease RuvC  39.74 
 
 
167 aa  115  1.9999999999999998e-25  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2364  Holliday junction resolvase  39.31 
 
 
173 aa  115  3e-25  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.00103097  n/a   
 
 
-
 
NC_011899  Hore_12330  crossover junction endodeoxyribonuclease RuvC  36 
 
 
165 aa  115  3e-25  Halothermothrix orenii H 168  Bacteria  normal  0.128626  n/a   
 
 
-
 
NC_013223  Dret_1747  Holliday junction resolvase  36.77 
 
 
170 aa  115  5e-25  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.607448  normal  0.595925 
 
 
-
 
NC_008576  Mmc1_0478  Holliday junction endonuclease RuvC  37.25 
 
 
180 aa  114  6.9999999999999995e-25  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000177165  normal  0.867612 
 
 
-
 
NC_007204  Psyc_0699  Holliday junction resolvase  38.46 
 
 
194 aa  113  1.0000000000000001e-24  Psychrobacter arcticus 273-4  Bacteria  normal  0.207762  normal 
 
 
-
 
NC_009436  Ent638_2431  Holliday junction resolvase  38.97 
 
 
173 aa  114  1.0000000000000001e-24  Enterobacter sp. 638  Bacteria  normal  0.0114674  normal 
 
 
-
 
NC_009012  Cthe_0180  Holliday junction resolvase  37.75 
 
 
162 aa  114  1.0000000000000001e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1346  Holliday junction resolvase  39.87 
 
 
166 aa  113  1.0000000000000001e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000000795843  n/a   
 
 
-
 
NC_008825  Mpe_A0482  Holliday junction resolvase  42.11 
 
 
184 aa  113  1.0000000000000001e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0464061 
 
 
-
 
NC_007969  Pcryo_0671  Holliday junction resolvase  38.46 
 
 
194 aa  114  1.0000000000000001e-24  Psychrobacter cryohalolentis K5  Bacteria  normal  0.674635  normal 
 
 
-
 
NC_012034  Athe_1114  Holliday junction resolvase  35.33 
 
 
164 aa  113  1.0000000000000001e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2946  Holliday junction resolvase  44.37 
 
 
173 aa  114  1.0000000000000001e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.185202  n/a   
 
 
-
 
NC_004347  SO_2431  Holliday junction resolvase  42.67 
 
 
173 aa  112  2.0000000000000002e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009708  YpsIP31758_2032  Holliday junction resolvase  38.24 
 
 
173 aa  113  2.0000000000000002e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.000234301  n/a   
 
 
-
 
NC_010465  YPK_2145  Holliday junction resolvase  38.24 
 
 
173 aa  113  2.0000000000000002e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.25841  n/a   
 
 
-
 
NC_010159  YpAngola_A2423  Holliday junction resolvase  38.24 
 
 
173 aa  113  2.0000000000000002e-24  Yersinia pestis Angola  Bacteria  normal  0.0385722  normal  0.655907 
 
 
-
 
NC_002936  DET0443  crossover junction endodeoxyribonuclease RuvC  39.51 
 
 
165 aa  112  3e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4543  Holliday junction resolvase  35.71 
 
 
174 aa  112  3e-24  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2535  Holliday junction resolvase  38.24 
 
 
173 aa  112  3e-24  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.278528 
 
 
-
 
NC_008009  Acid345_3618  crossover junction endodeoxyribonuclease RuvC  37.33 
 
 
166 aa  112  3e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.1831  normal  0.457471 
 
 
-
 
NC_009524  PsycPRwf_1433  Holliday junction resolvase  38.22 
 
 
194 aa  112  4.0000000000000004e-24  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2157  Holliday junction resolvase  38.97 
 
 
173 aa  112  4.0000000000000004e-24  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2354  Holliday junction resolvase  36.9 
 
 
180 aa  112  4.0000000000000004e-24  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.542113 
 
 
-
 
NC_012912  Dd1591_2259  Holliday junction resolvase  36.76 
 
 
173 aa  112  4.0000000000000004e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0995  crossover junction endodeoxyribonuclease RuvC  35.81 
 
 
183 aa  111  5e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.410626  normal 
 
 
-
 
NC_009712  Mboo_0111  Holliday junction resolvase  38.41 
 
 
156 aa  111  6e-24  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
CP001509  ECD_01834  Holliday junction resolvase  38.97 
 
 
173 aa  111  7.000000000000001e-24  Escherichia coli BL21(DE3)  Bacteria  normal  0.837934  n/a   
 
 
-
 
CP001637  EcDH1_1777  crossover junction endodeoxyribonuclease RuvC  38.97 
 
 
173 aa  111  7.000000000000001e-24  Escherichia coli DH1  Bacteria  hitchhiker  0.00202932  n/a   
 
 
-
 
NC_010658  SbBS512_E1109  Holliday junction resolvase  38.97 
 
 
173 aa  111  7.000000000000001e-24  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_385  crossover junction endodeoxyribonuclease  39.51 
 
 
165 aa  111  7.000000000000001e-24  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1769  Holliday junction resolvase  38.97 
 
 
173 aa  111  7.000000000000001e-24  Escherichia coli ATCC 8739  Bacteria  normal  0.0125353  normal 
 
 
-
 
NC_011149  SeAg_B1225  Holliday junction resolvase  39.71 
 
 
173 aa  111  7.000000000000001e-24  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.177509  n/a   
 
 
-
 
NC_011080  SNSL254_A2057  Holliday junction resolvase  39.71 
 
 
173 aa  111  7.000000000000001e-24  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0681914 
 
 
-
 
NC_009800  EcHS_A1956  Holliday junction resolvase  38.97 
 
 
173 aa  111  7.000000000000001e-24  Escherichia coli HS  Bacteria  normal  0.396234  n/a   
 
 
-
 
NC_011083  SeHA_C2112  Holliday junction resolvase  39.71 
 
 
173 aa  111  7.000000000000001e-24  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0214105 
 
 
-
 
NC_011094  SeSA_A2052  Holliday junction resolvase  39.71 
 
 
173 aa  111  7.000000000000001e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01822  hypothetical protein  38.97 
 
 
173 aa  111  7.000000000000001e-24  Escherichia coli BL21  Bacteria  normal  0.621329  n/a   
 
 
-
 
NC_011205  SeD_A1349  Holliday junction resolvase  39.71 
 
 
173 aa  111  7.000000000000001e-24  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.00353939 
 
 
-
 
NC_011353  ECH74115_2599  Holliday junction resolvase  38.97 
 
 
173 aa  111  7.000000000000001e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.109079  normal 
 
 
-
 
NC_010498  EcSMS35_1323  Holliday junction resolvase  38.97 
 
 
173 aa  111  7.000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3856  Holliday junction resolvase  35.9 
 
 
183 aa  110  8.000000000000001e-24  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2102  Holliday junction resolvase  36.76 
 
 
173 aa  110  9e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl1250  Holliday junction resolvase  41.03 
 
 
174 aa  110  1.0000000000000001e-23  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_1408  Holliday junction resolvase  35.71 
 
 
174 aa  110  1.0000000000000001e-23  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0741674  normal 
 
 
-
 
NC_008321  Shewmr4_1900  Holliday junction resolvase  41.33 
 
 
173 aa  110  1.0000000000000001e-23  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000300533  hitchhiker  0.000114763 
 
 
-
 
NC_008322  Shewmr7_2078  Holliday junction resolvase  41.33 
 
 
173 aa  110  1.0000000000000001e-23  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000308371  hitchhiker  0.00162508 
 
 
-
 
NC_009832  Spro_2778  Holliday junction resolvase  34.36 
 
 
173 aa  110  1.0000000000000001e-23  Serratia proteamaculans 568  Bacteria  normal  0.0426005  normal  0.0283844 
 
 
-
 
NC_008463  PA14_51800  Holliday junction resolvase  35.06 
 
 
174 aa  110  1.0000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000486306 
 
 
-
 
NC_009801  EcE24377A_2093  Holliday junction resolvase  38.24 
 
 
173 aa  110  1.0000000000000001e-23  Escherichia coli E24377A  Bacteria  hitchhiker  0.00029798  n/a   
 
 
-
 
NC_012917  PC1_1818  Holliday junction resolvase  36.76 
 
 
173 aa  110  1.0000000000000001e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.311556  n/a   
 
 
-
 
NC_007498  Pcar_2336  Holliday junction resolvase  41.18 
 
 
161 aa  109  2.0000000000000002e-23  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0868617  n/a   
 
 
-
 
NC_007984  BCI_0314  crossover junction endodeoxyribonuclease RuvC  37.5 
 
 
173 aa  110  2.0000000000000002e-23  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  0.290454  n/a   
 
 
-
 
NC_010682  Rpic_0379  Holliday junction resolvase  36 
 
 
181 aa  109  3e-23  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3627  Holliday junction resolvase  33.77 
 
 
165 aa  109  3e-23  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00535771  n/a   
 
 
-
 
NC_009439  Pmen_1270  Holliday junction resolvase  35.9 
 
 
174 aa  108  4.0000000000000004e-23  Pseudomonas mendocina ymp  Bacteria  normal  0.460583  normal  0.748169 
 
 
-
 
NC_007520  Tcr_0892  crossover junction endodeoxyribonuclease RuvC  40 
 
 
172 aa  108  4.0000000000000004e-23  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00082317  n/a   
 
 
-
 
NC_008789  Hhal_2211  Holliday junction resolvase  40.3 
 
 
167 aa  108  4.0000000000000004e-23  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0394  Holliday junction resolvase  36 
 
 
181 aa  108  4.0000000000000004e-23  Ralstonia pickettii 12D  Bacteria  normal  normal  0.638558 
 
 
-
 
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