Gene Mmc1_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0478 
Symbol 
ID4481260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp576871 
End bp577413 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content59% 
IMG OID639721225 
ProductHolliday junction endonuclease RuvC 
Protein accessionYP_864409 
Protein GI117923792 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000177165 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.867612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG CAAGCCCCAT CCGTGTCATT GGTATTGACC CAGGCAGTAA TGTCACCGGA 
TGGGGCGTCA TTGATGGCTT AGGCCAGCGT CAGCAGGTGG TGGAGTATGG CACCATCCGC
CTTGATGGCA AGGAGCCCTT ACCCATGCGC CTGCATCAAA TCCACGCCCA GTTGGTCAGC
CTTATCCAGC GCCTGCAACC CCATGAAATG GCGGTGGAGG AGGTGTTCGT TTCGCAAAAC
GTACAGAGCG CGCTCAAGCT TGGCCATGCG CGGGGGGCCG CCATTGTGGC CGGTGCGCAG
ATGGGTCTGC CCATTGCGGA GTATACCGCC ATGCAGGTCA AAAAAGCGGT GGTGGGTTAT
GGCCGGGCCG AGAAAAACCA GATGCAGGAG ATGATGCGCA TGCTGCTTAA TCTGGATAAA
AAGCCGGCGC AGGATGCCGC CGATGGTCTT GCCATTGCCA TGTGCCACCT TAACCAACGG
CAATGGCATC AGCAGACGCT GCCAGCGGCG ATCCTTGGTC TACAGCGGGG GGGGCGTGCA
TGA
 
Protein sequence
MSSASPIRVI GIDPGSNVTG WGVIDGLGQR QQVVEYGTIR LDGKEPLPMR LHQIHAQLVS 
LIQRLQPHEM AVEEVFVSQN VQSALKLGHA RGAAIVAGAQ MGLPIAEYTA MQVKKAVVGY
GRAEKNQMQE MMRMLLNLDK KPAQDAADGL AIAMCHLNQR QWHQQTLPAA ILGLQRGGRA