Gene Rxyl_1322 details

Gene Information

• Locus tag: Rxyl_1322
• ID: 4115989
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1349747
• End bp: 1350286
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638036116
• Product: crossover junction endodeoxyribonuclease RuvC
• Protein accession: YP_644098
• Protein GI: 108804161
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0725718
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGGCT CCCAAACAAA GCAGGTCATC CTCGGGATAG ACCCCGGCAC CGCCACCATG 
GGCTGGGGGG TGGTGCGGCA GGAGGGGAGC CGGCTGCGCT ACGTGCAGCA CGGGGCGATC 
ACCACCCCCT CCGGGTGGGG GATGCCGCGC CGGCTCGACC GCCTCTTCGC CGGTGTGACC 
GAGCTGATCC GGGGGTATAG GCCCTCGGCG GTGGCGGTGG AGGAGCTCTT CTTCAACACC 
AACGTCACCA CCGCCATCAC CGTCGGCCAG GCACGCGGGG TCGCGCTGCT CGCCGCCTAC 
CGGGCCGGGG TGGAGGTCTT CGAGTACACC CCGTTGCAGG TCAAGCAGGC CATCACCTCC 
TACGGCCGGG CGGACAAGCG GCAGGTGCAG GAGATGGTGC GCGCGCTGCT GGGCCTGCGG 
TCCATCCCCC GGCCGGATGA TGCCGCCGAC GGGCTCGCCA TCGCCATCTG CCACGCCTTC 
TCCCACCGGA TGTCGGCGGC GACGGGGGTG GGTAAACCGC GGGCCATGCA GGATAATTGA 

 

Protein sequence

MLGSQTKQVI LGIDPGTATM GWGVVRQEGS RLRYVQHGAI TTPSGWGMPR RLDRLFAGVT 
ELIRGYRPSA VAVEELFFNT NVTTAITVGQ ARGVALLAAY RAGVEVFEYT PLQVKQAITS 
YGRADKRQVQ EMVRALLGLR SIPRPDDAAD GLAIAICHAF SHRMSAATGV GKPRAMQDN