Gene VC0395_A1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1438 
SymbolruvC 
ID5137369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1539769 
End bp1540290 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content50% 
IMG OID640532896 
ProductHolliday junction resolvase 
Protein accessionYP_001217381 
Protein GI147673791 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000786785 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTCA TCTTAGGGAT TGATCCTGGA TCGCGCGTGA CGGGGTATGG TGTGATTCGT 
CAACAAGGAC GACACCTTAT CTACCTCGGT AGCGGTTGTA TCCGTACTTC CGATCTCGAG
TTACCGTTAC GCCTGAAACA AATCTATGCG GGCGTGAGTG AAATCATCAC CCAATTTCAG
CCGGATGCCT TTGCCATTGA GCAGGTGTTT ATGGCAAAGA ATGCCGATTC AGCATTAAAA
CTTGGTCAAG CCCGCGGCAG TGCGATTGTG GCGGCGGTGA ACGCAGAACT TCCTGTTTAT
GAATATGCTG CCAGACTGAT TAAACAAGCG GTCGTTGGTA CGGGAGCGGC TGATAAAAGC
CAAGTTCAAC ATATGGTGCA GCAGATGCTC AAACTGCCCG GTAAGCCCCA AGCCGATGCA
GCAGATGCTT TAGGTGTTGC TATTTGTCAT GCTAATACCA ACAAAACTCT AATTGCATTG
GCAGGGCAGG CAACGAGTGC GCGTAGAGGT CGTTATCGTT AA
 
Protein sequence
MSVILGIDPG SRVTGYGVIR QQGRHLIYLG SGCIRTSDLE LPLRLKQIYA GVSEIITQFQ 
PDAFAIEQVF MAKNADSALK LGQARGSAIV AAVNAELPVY EYAARLIKQA VVGTGAADKS
QVQHMVQQML KLPGKPQADA ADALGVAICH ANTNKTLIAL AGQATSARRG RYR