Gene Psyr_1408 details

Gene Information

• Locus tag: Psyr_1408
• Symbol: ruvC
• ID: 3366905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: +
• Start bp: 1594950
• End bp: 1595474
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637651749
• Product: Holliday junction resolvase
• Protein accession: YP_234497
• Protein GI: 66044656
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0741674
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTCTTA TTCTTGGTAT CGATCCCGGT TCGCGAATCA CCGGCTATGG CGTGGTACGC 
GACACCGGGC GCGGCTGTGT CTATGTCGCG TCGGGCTGCA TCCGCACCGG CAGCGGCGAG 
CTGCATGAGC GTTTGCAGAT CGTTTATCGC GGTGTGCGGG AAGTCATCAA GACCTACGAA 
CCAGTGACGA TGGGCATCGA AAAGGTTTTC ATGGCGCGTA ACGCCGATTC GGCATTGAAG 
CTGGGGCAGG CCAGGGGCGC AGCCATCGTG GCGGGTGCCG AAGAGGCGCT GGAAATTGCC 
GAATACACCG CAACCCAGGT CAAGCAGGCA GTTGCAGGAA CCGGCGGTGC CAATAAGGAA 
CAGGTGATGA TGATGGTCAT GCACCTGCTC AAGCTGACCC AGAAGCCGCA AATCGATGCG 
TCCGATGCCC TTGCCATCGC CCTGTGCCAC GCGCATACGC GTTCCAGTCT GATTCCTCAC 
GGCTTGGGCA CTGCGCGCAG TCGCGGCGGC CGCTTGCGGC TCTAG 

 

Protein sequence

MTLILGIDPG SRITGYGVVR DTGRGCVYVA SGCIRTGSGE LHERLQIVYR GVREVIKTYE 
PVTMGIEKVF MARNADSALK LGQARGAAIV AGAEEALEIA EYTATQVKQA VAGTGGANKE 
QVMMMVMHLL KLTQKPQIDA SDALAIALCH AHTRSSLIPH GLGTARSRGG RLRL