Gene Psyr_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1408 
SymbolruvC 
ID3366905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1594950 
End bp1595474 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content61% 
IMG OID637651749 
ProductHolliday junction resolvase 
Protein accessionYP_234497 
Protein GI66044656 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0741674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTA TTCTTGGTAT CGATCCCGGT TCGCGAATCA CCGGCTATGG CGTGGTACGC 
GACACCGGGC GCGGCTGTGT CTATGTCGCG TCGGGCTGCA TCCGCACCGG CAGCGGCGAG
CTGCATGAGC GTTTGCAGAT CGTTTATCGC GGTGTGCGGG AAGTCATCAA GACCTACGAA
CCAGTGACGA TGGGCATCGA AAAGGTTTTC ATGGCGCGTA ACGCCGATTC GGCATTGAAG
CTGGGGCAGG CCAGGGGCGC AGCCATCGTG GCGGGTGCCG AAGAGGCGCT GGAAATTGCC
GAATACACCG CAACCCAGGT CAAGCAGGCA GTTGCAGGAA CCGGCGGTGC CAATAAGGAA
CAGGTGATGA TGATGGTCAT GCACCTGCTC AAGCTGACCC AGAAGCCGCA AATCGATGCG
TCCGATGCCC TTGCCATCGC CCTGTGCCAC GCGCATACGC GTTCCAGTCT GATTCCTCAC
GGCTTGGGCA CTGCGCGCAG TCGCGGCGGC CGCTTGCGGC TCTAG
 
Protein sequence
MTLILGIDPG SRITGYGVVR DTGRGCVYVA SGCIRTGSGE LHERLQIVYR GVREVIKTYE 
PVTMGIEKVF MARNADSALK LGQARGAAIV AGAEEALEIA EYTATQVKQA VAGTGGANKE
QVMMMVMHLL KLTQKPQIDA SDALAIALCH AHTRSSLIPH GLGTARSRGG RLRL