Gene Tery_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3620 
SymbolruvC 
ID4244137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5564312 
End bp5564803 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content33% 
IMG OID638108575 
ProductHolliday junction resolvase 
Protein accessionYP_723164 
Protein GI113477103 
COG category[L] Replication, recombination and repair 
COG ID[COG0817] Holliday junction resolvasome, endonuclease subunit 
TIGRFAM ID[TIGR00228] crossover junction endodeoxyribonuclease RuvC 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAT TAATTCTCGG ATTAGATCCA GGTTTAGCGG TACTAGGATT TGGATTAATT 
AAGTGTATTT ATAATTCAAA AACAGAAAAA ATAGATTCTA CTTCTCTGGT TGATTTTGGG
GTAATTAAAA CTACAAAAAA ACAAGAAATG GGGCAACGTC TCGTCACAAT ATATGAAGAT
TTACATACTA TCCTAAATAA CTTTAAACCA GACTTGGCAG CTACAGAAAA GTTATTCTTT
TATCGTATGG GTAATACAAT TTTAGTTGCC CAAGCTAGAG GAATTTTAAT ATTGGCATTA
GCACAAAATG AAATTCCATT AATTGAGTTT ACACCCGCAC AAATTAAGCA AGCAGTAACA
GGTTATGGCA ATGCAGATAA ATATGATGTG CAACAAGCAG TAGCAAGGGA ATTAAATTTG
GAGGAAATTC CTAAACCAGA TGATGCTGCT GATGCTTTAG CAGTTGCTCT AACAGCAAGT
TGGTTAAATT AA
 
Protein sequence
MEKLILGLDP GLAVLGFGLI KCIYNSKTEK IDSTSLVDFG VIKTTKKQEM GQRLVTIYED 
LHTILNNFKP DLAATEKLFF YRMGNTILVA QARGILILAL AQNEIPLIEF TPAQIKQAVT
GYGNADKYDV QQAVARELNL EEIPKPDDAA DALAVALTAS WLN