| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0426 |
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| Symbol | ruvC |
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| ID | 4037214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 450724 |
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| End bp | 451269 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975800 |
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| Product | Holliday junction resolvase |
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| Protein accession | YP_582581 |
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| Protein GI | 94309371 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
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| TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.633574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.046933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATTC TCGGCATCGA CCCCGGTTTG CGAACCACTG GCTTTGGCGT GCTCGAAAAG
CACGGCAACA AGCTCGCCTA TGTCGCGTCG GGCACGATCC GCAGCAATGG CGAGACCAGC
CTTCCCGAAC GCCTGAAGAC GCTCTACGAC GGCATCTCCG AAGTCGCGCG GACCTACGCG
CCAGACTGCG CAGCAATTGA AAAGGTCTTC GTCAACGTCA ATCCGCAATC GACCCTGTTG
CTCGGCCAGG CACGCGGCGC GGCGATCTGC GGGCTGGTCG GACAAGGGCT GCCTGTATTC
GAATACACCG CGCTGCAGCT CAAGGTGGCC GTGGTCGGAT ACGGCCGGGC CAACAAGGAG
CAGGTTCAGG AAATGGTGAT GCGGCTGCTG TCGCTGTCCG GCCGTCCGAG TTCCGATGCG
GCCGATGCGC TTGGCGTGGC GATCTGCCAT GCCAATGGCG GCGACACCCT CGGCACGCTG
GCCGGGCTGG CGCCTGAGCT GGCGCGCAAG GGAATGCGCG TGCGGCGCGG CCGGCTGGTC
GGCTGA
|
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| Protein sequence | MRILGIDPGL RTTGFGVLEK HGNKLAYVAS GTIRSNGETS LPERLKTLYD GISEVARTYA
PDCAAIEKVF VNVNPQSTLL LGQARGAAIC GLVGQGLPVF EYTALQLKVA VVGYGRANKE
QVQEMVMRLL SLSGRPSSDA ADALGVAICH ANGGDTLGTL AGLAPELARK GMRVRRGRLV
G
|
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